Information for 21-TGCATAGAATATA (Motif 37)

A C G T A C T G A G T C C G T A C A G T C G T A A C T G C G T A C G T A C G A T G T C A A C G T C G T A
Reverse Opposite:
C G A T C G T A A C G T C G T A A C G T A C G T A G T C A C G T G C T A A C G T A C T G A G T C C G T A
p-value:1e-4
log p-value:-1.057e+01
Information Content per bp:1.901
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.3 +/- 24.6bp
Average Position of motif in Background47.2 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGCATAGAATATA
ATTTGCATACAATGG-
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C A G T C G T A A C T G C G T A C G T A C G A T G T C A A C G T C G T A
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:2
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TGCATAGAATATA
AAAATATGCATAATAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C A G T C G T A A C T G C G T A C G T A C G A T G T C A A C G T C G T A
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGCATAGAATATA
TTCCKNAGAA----
 A C G T A C G T A C T G A G T C C G T A C A G T C G T A A C T G C G T A C G T A C G A T G T C A A C G T C G T A
G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGCATAGAATATA
NTTTCTNAGAAA---
 A C G T A C G T A C G T A C T G A G T C C G T A C A G T C G T A A C T G C G T A C G T A C G A T G T C A A C G T C G T A
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGCATAGAATATA
CGAAGCACACAAAATA
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C A G T C G T A A C T G C G T A C G T A C G A T G T C A A C G T C G T A
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TGCATAGAATATA
CAATTGCAAAAATAT--
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C A G T C G T A A C T G C G T A C G T A C G A T G T C A A C G T C G T A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGCATAGAATATA
ATTTCCAAGAA----
 A C G T A C G T A C G T A C T G A G T C C G T A C A G T C G T A A C T G C G T A C G T A C G A T G T C A A C G T C G T A
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:8
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------TGCATAGAATATA
TNTAATTTGCATACNA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C A G T C G T A A C T G C G T A C G T A C G A T G T C A A C G T C G T A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T A C G T A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:9
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------TGCATAGAATATA
TNTAATTTGCATACNA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C A G T C G T A A C T G C G T A C G T A C G A T G T C A A C G T C G T A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:10
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------TGCATAGAATATA
TACATGTGCACATAAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C A G T C G T A A C T G C G T A C G T A C G A T G T C A A C G T C G T A
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T A C G T