Information for 9-CAGGCTTCAAGGA (Motif 24)

A G T C C G T A A C T G A T C G A G T C A C G T A C G T A T G C C T G A C T G A A C T G A T C G C G T A
Reverse Opposite:
A C G T A T G C A G T C A G C T A G C T A T C G C G T A C G T A A C T G A T G C A G T C A C G T A C T G
p-value:1e-9
log p-value:-2.082e+01
Information Content per bp:1.931
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.2 +/- 14.0bp
Average Position of motif in Background14.9 +/- 4.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAGGCTTCAAGGA
CAAGCTT------
 A G T C C G T A A C T G A T C G A G T C A C G T A C G T A T G C C T G A C T G A A C T G A T C G C G T A
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAGGCTTCAAGGA--
-NGCTTTCTAGGAAN
 A G T C C G T A A C T G A T C G A G T C A C G T A C G T A T G C C T G A C T G A A C T G A T C G C G T A A C G T A C G T
A C G T C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

Stat4/MA0518.1/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CAGGCTTCAAGGA-----
----TTTCCAGGAAATGG
 A G T C C G T A A C T G A T C G A G T C A C G T A C G T A T G C C T G A C T G A A C T G A T C G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

STAT1/MA0137.3/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CAGGCTTCAAGGA--
----TTTCCAGGAAA
 A G T C C G T A A C T G A T C G A G T C A C G T A C G T A T G C C T G A C T G A A C T G A T C G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAGGCTTCAAGGA--
NNNCTTTCCAGGAAA
 A G T C C G T A A C T G A T C G A G T C A C G T A C G T A T G C C T G A C T G A A C T G A T C G C G T A A C G T A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CAGGCTTCAAGGA
---GCTTCC----
 A G T C C G T A A C T G A T C G A G T C A C G T A C G T A T G C C T G A C T G A A C T G A T C G C G T A
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CAGGCTTCAAGGA--
---NTTTCCNGGAAA
 A G T C C G T A A C T G A T C G A G T C A C G T A C G T A T G C C T G A C T G A A C T G A T C G C G T A A C G T A C G T
A C G T A C G T A C G T T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCTTCAAGGA
CNAGGCCT------
 A C G T A G T C C G T A A C T G A T C G A G T C A C G T A C G T A T G C C T G A C T G A A C T G A T C G C G T A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CAGGCTTCAAGGA--
-----NTCAAGGTCA
 A G T C C G T A A C T G A T C G A G T C A C G T A C G T A T G C C T G A C T G A A C T G A T C G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CAGGCTTCAAGGA---
--NNCTTCCNGGAAGN
 A G T C C G T A A C T G A T C G A G T C A C G T A C G T A T G C C T G A C T G A A C T G A T C G C G T A A C G T A C G T A C G T
A C G T A C G T A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C