Information for 6-BCAGGGGAWWGGG (Motif 20)

A G C T G T A C C G T A A C T G C T A G C T A G A C T G G T C A G C A T C G A T A C T G A C T G C T A G
Reverse Opposite:
A G T C A G T C A G T C C G A T C G T A A C G T A G T C A G T C A G T C A G T C A C G T A C T G T C A G
p-value:1e-10
log p-value:-2.361e+01
Information Content per bp:1.770
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.23%
Number of Background Sequences with motif108.7
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets55.1 +/- 27.8bp
Average Position of motif in Background51.5 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:BCAGGGGAWWGGG
-AAGAGGATTAG-
 A G C T G T A C C G T A A C T G C T A G C T A G A C T G G T C A G C A T C G A T A C T G A C T G C T A G
A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:BCAGGGGAWWGGG
--TGGGGA-----
 A G C T G T A C C G T A A C T G C T A G C T A G A C T G G T C A G C A T C G A T A C T G A C T G C T A G
A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

SP3/MA0746.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:BCAGGGGAWWGGG
--GGGGGCGTGGN
 A G C T G T A C C G T A A C T G C T A G C T A G A C T G G T C A G C A T C G A T A C T G A C T G C T A G
A C G T A C G T C T A G C A T G T C A G C A T G C A T G G A T C C T A G A C G T C A T G C A T G A T G C

SPIB/MA0081.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:BCAGGGGAWWGGG
--AGAGGAA----
 A G C T G T A C C G T A A C T G C T A G C T A G A C T G G T C A G C A T C G A T A C T G A C T G C T A G
A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:BCAGGGGAWWGGG--
-TAGGGCAAAGGTCA
 A G C T G T A C C G T A A C T G C T A G C T A G A C T G G T C A G C A T C G A T A C T G A C T G C T A G A C G T A C G T
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:BCAGGGGAWWGGG
GGAGGGGGAA---
 A G C T G T A C C G T A A C T G C T A G C T A G A C T G G T C A G C A T C G A T A C T G A C T G C T A G
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----BCAGGGGAWWGGG
GTCCCCAGGGGA-----
 A C G T A C G T A C G T A C G T A G C T G T A C C G T A A C T G C T A G C T A G A C T G G T C A G C A T C G A T A C T G A C T G C T A G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T A C G T

KLF16/MA0741.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:BCAGGGGAWWGGG
--GGGGGCGTGGC
 A G C T G T A C C G T A A C T G C T A G C T A G A C T G G T C A G C A T C G A T A C T G A C T G C T A G
A C G T A C G T C T A G C A T G C T A G A T C G A C T G G A T C C A T G A C G T C A T G C A T G A G T C

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:BCAGGGGAWWGGG---
NNAGGGGCGGGGTNNA
 A G C T G T A C C G T A A C T G C T A G C T A G A C T G G T C A G C A T C G A T A C T G A C T G C T A G A C G T A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

PB0097.1_Zfp281_1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:BCAGGGGAWWGGG--
GGGGGGGGGGGGGGA
 A G C T G T A C C G T A A C T G C T A G C T A G A C T G G T C A G C A T C G A T A C T G A C T G C T A G A C G T A C G T
A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A