Information for 4-GGTTTTTGATGGA (Motif 12)

A C T G A T C G A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C G T A C T G A T C G C G T A
Reverse Opposite:
A C G T T A G C A G T C C G T A A C G T A G T C C G T A C G T A C G T A C G T A C G T A A T G C A G T C
p-value:1e-11
log p-value:-2.629e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.2 +/- 25.6bp
Average Position of motif in Background29.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGTTTTTGATGGA---
NNNNNATTGATGNGTGN
 A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C G T A C T G A T C G C G T A A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GGTTTTTGATGGA
----TTTAAT---
 A C T G A T C G A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C G T A C T G A T C G C G T A
A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGTTTTTGATGGA---
----TTTGATTGATGN
 A C T G A T C G A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C G T A C T G A T C G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGTTTTTGATGGA--
GNATTTTTTTTTTGANC
 A C G T A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C G T A C T G A T C G C G T A A C G T A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

PB0082.1_Tcf3_1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGTTTTTGATGGA--
NNTTCCTTTGATCTANA
 A C G T A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C G T A C T G A T C G C G T A A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GGTTTTTGATGGA----
-----ATGATKGATGRC
 A C T G A T C G A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C G T A C T G A T C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

PH0064.1_Hoxb9/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGTTTTTGATGGA---
NGANTTTTATGGCTCN
 A C T G A T C G A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C G T A C T G A T C G C G T A A C G T A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGTTTTTGATGGA---
-CTTTGTTATGCAAAT
 A C T G A T C G A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C G T A C T G A T C G C G T A A C G T A C G T A C G T
A C G T A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGTTTTTGATGGA--
ATTTCCTTTGATCTATA
 A C G T A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C G T A C T G A T C G C G T A A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGTTTTTGATGGA--
NNTTCCTTTGATCTNNA
 A C G T A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C G T A C T G A T C G C G T A A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A