Information for 1-TTAGAWACAGTAAGCC (Motif 1)

C G A T C G A T C T G A C T A G C G T A C G A T C G T A A G T C C G T A A C T G C G A T C T G A C G T A T C A G A G T C A G T C
Reverse Opposite:
C T A G A C T G A G T C C G A T A G C T C G T A G T A C C G A T A C T G A C G T C G T A C G A T A G T C A G C T C G T A C G T A
p-value:1e-16
log p-value:-3.864e+01
Information Content per bp:1.753
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.9 +/- 24.7bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TTAGAWACAGTAAGCC
CTACTTGGATACGGAAT---
 A C G T A C G T A C G T A C G T C G A T C G A T C T G A C T A G C G T A C G A T C G T A A G T C C G T A A C T G C G A T C T G A C G T A T C A G A G T C A G T C
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTAGAWACAGTAAGCC
NTTGATACATT-----
 C G A T C G A T C T G A C T A G C G T A C G A T C G T A A G T C C G T A A C T G C G A T C T G A C G T A T C A G A G T C A G T C
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:3
Score:0.55
Offset:-8
Orientation:forward strand
Alignment:--------TTAGAWACAGTAAGCC
ACTGACCCTTGGTTACCACAAAG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T C T G A C T A G C G T A C G A T C G T A A G T C C G T A A C T G C G A T C T G A C G T A T C A G A G T C A G T C
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TTAGAWACAGTAAGCC
-----AACAGGAAGT-
 C G A T C G A T C T G A C T A G C G T A C G A T C G T A A G T C C G T A A C T G C G A T C T G A C G T A T C A G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TTAGAWACAGTAAGCC
-----CACAGN-----
 C G A T C G A T C T G A C T A G C G T A C G A T C G T A A G T C C G T A A C T G C G A T C T G A C G T A T C A G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TTAGAWACAGTAAGCC
---GAAACTGAAACT-
 C G A T C G A T C T G A C T A G C G T A C G A T C G T A A G T C C G T A A C T G C G A T C T G A C G T A T C A G A G T C A G T C
A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TTAGAWACAGTAAGCC
---GAAAGTGAAAGT-
 C G A T C G A T C T G A C T A G C G T A C G A T C G T A A G T C C G T A A C T G C G A T C T G A C G T A T C A G A G T C A G T C
A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TTAGAWACAGTAAGCC
-----NACAGGAAAT-
 C G A T C G A T C T G A C T A G C G T A C G A T C G T A A G T C C G T A A C T G C G A T C T G A C G T A T C A G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TTAGAWACAGTAAGCC
-TWGHWACAWTGTWDC
 C G A T C G A T C T G A C T A G C G T A C G A T C G T A A G T C C G T A A C T G C G A T C T G A C G T A T C A G A G T C A G T C
A C G T G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TTAGAWACAGTAAGCC
SCCTAGCAACAG------
 A C G T A C G T C G A T C G A T C T G A C T A G C G T A C G A T C G T A A G T C C G T A A C T G C G A T C T G A C G T A T C A G A G T C A G T C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T