Information for 4-AAATCCAAAC (Motif 8)

C G T A C G T A C G T A G A C T A G T C A G T C C G T A C T G A T G C A A T G C
Reverse Opposite:
A T C G A C G T A G C T A C G T C T A G A C T G C T G A C G A T A C G T A C G T
p-value:1e-10
log p-value:-2.504e+01
Information Content per bp:1.863
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif43.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets44.7 +/- 26.6bp
Average Position of motif in Background43.4 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0037.1_Isgf3g_1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAATCCAAAC---
CAAAATCGAAACTAA
 A C G T A C G T C G T A C G T A C G T A G A C T A G T C A G T C C G T A C T G A T G C A A T G C A C G T A C G T A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

PB0035.1_Irf5_1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AAATCCAAAC---
ATAAACCGAAACCAA
 A C G T A C G T C G T A C G T A C G T A G A C T A G T C A G T C C G T A C T G A T G C A A T G C A C G T A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AAATCCAAAC-
-ATGCCAGACN
 C G T A C G T A C G T A G A C T A G T C A G T C C G T A C T G A T G C A A T G C A C G T
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAATCCAAAC------
CAAATCCAGACATCACA
 A C G T C G T A C G T A C G T A G A C T A G T C A G T C C G T A C T G A T G C A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAATCCAAAC
TCCAATCCACA-
 A C G T A C G T C G T A C G T A C G T A G A C T A G T C A G T C C G T A C T G A T G C A A T G C
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AAATCCAAAC-
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A G A C T A G T C A G T C C G T A C T G A T G C A A T G C A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

IRF8/MA0652.1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AAATCCAAAC-
TCGAAACCGAAACT
 A C G T A C G T A C G T C G T A C G T A C G T A G A C T A G T C A G T C C G T A C T G A T G C A A T G C A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

PB0033.1_Irf3_1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAATCCAAAC--
GAGAACCGAAACTG
 A C G T A C G T C G T A C G T A C G T A G A C T A G T C A G T C C G T A C T G A T G C A A T G C A C G T A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

PB0034.1_Irf4_1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAATCCAAAC----
CGTATCGAAACCAAA
 A C G T C G T A C G T A C G T A G A C T A G T C A G T C C G T A C T G A T G C A A T G C A C G T A C G T A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAATCCAAAC-
SSAATCCACANN
 A C G T C G T A C G T A C G T A G A C T A G T C A G T C C G T A C T G A T G C A A T G C A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C