Information for 6-CTGCTCCGACACGTTC (Motif 21)

A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A G T C A C T G A C G T A C T G A C G T A G T C A C T G A C T G C G T A A C T G A G T C C G T A A C T G
p-value:1e-8
log p-value:-1.874e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.5 +/- 23.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTGCTCCGACACGTTC
--GCTCCG--------
 A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T A G T C
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTGCTCCGACACGTTC
---TAACGACACGTGC
 A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T A G T C
A C G T A C G T A C G T A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

HES5/MA0821.1/Jaspar

Match Rank:3
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CTGCTCCGACACGTTC--
------CGGCACGTGCCA
 A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A

HEY2/MA0649.1/Jaspar

Match Rank:4
Score:0.56
Offset:7
Orientation:forward strand
Alignment:CTGCTCCGACACGTTC-
-------GACACGTGCC
 A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTGCTCCGACACGTTC--
--NNGGCGACACCTCNNN
 A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

HEY1/MA0823.1/Jaspar

Match Rank:6
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CTGCTCCGACACGTTC-
-------GACACGTGCC
 A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:CTGCTCCGACACGTTC
--------GCACGTNC
 A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

Npas2/MA0626.1/Jaspar

Match Rank:8
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CTGCTCCGACACGTTC-
-------NACACGTGCN
 A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

Mlxip/MA0622.1/Jaspar

Match Rank:9
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:CTGCTCCGACACGTTC
--------ACACGTGC
 A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C

Arnt/MA0004.1/Jaspar

Match Rank:10
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:CTGCTCCGACACGTTC
---------CACGTG-
 A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T