Information for 8-RCCAGCTGCAGCG (Motif 19)

T C G A A T G C G T A C T G C A A C T G A T G C G C A T A T C G G T A C G T C A C T A G A T G C A C T G
Reverse Opposite:
G T A C A T C G A G T C C A G T A C T G A T G C C G T A A T C G A G T C A C G T A C T G A T C G A G C T
p-value:1e-8
log p-value:-2.069e+01
Information Content per bp:1.747
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif3.60%
Number of Background Sequences with motif478.6
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets57.5 +/- 23.2bp
Average Position of motif in Background54.3 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:RCCAGCTGCAGCG
AGCAGCTGCTNN-
 T C G A A T G C G T A C T G C A A C T G A T G C G C A T A T C G G T A C G T C A C T A G A T G C A C T G
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:RCCAGCTGCAGCG
-NCAGCTGCTG--
 T C G A A T G C G T A C T G C A A C T G A T G C G C A T A T C G G T A C G T C A C T A G A T G C A C T G
A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---RCCAGCTGCAGCG-
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T T C G A A T G C G T A C T G C A A C T G A T G C G C A T A T C G G T A C G T C A C T A G A T G C A C T G A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:RCCAGCTGCAGCG
AGCAGCTGCT---
 T C G A A T G C G T A C T G C A A C T G A T G C G C A T A T C G G T A C G T C A C T A G A T G C A C T G
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:RCCAGCTGCAGCG
GACAGCTGCAG--
 T C G A A T G C G T A C T G C A A C T G A T G C G C A T A T C G G T A C G T C A C T A G A T G C A C T G
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:RCCAGCTGCAGCG
AACAGCTGCAG--
 T C G A A T G C G T A C T G C A A C T G A T G C G C A T A T C G G T A C G T C A C T A G A T G C A C T G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-RCCAGCTGCAGCG
NNACAGCTGC----
 A C G T T C G A A T G C G T A C T G C A A C T G A T G C G C A T A T C G G T A C G T C A C T A G A T G C A C T G
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:RCCAGCTGCAGCG
---CGCAGCTGCG
 T C G A A T G C G T A C T G C A A C T G A T G C G C A T A T C G G T A C G T C A C T A G A T G C A C T G
A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:RCCAGCTGCAGCG
ANCAGCTG-----
 T C G A A T G C G T A C T G C A A C T G A T G C G C A T A T C G G T A C G T C A C T A G A T G C A C T G
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---RCCAGCTGCAGCG
NGNGACAGCTGCN---
 A C G T A C G T A C G T T C G A A T G C G T A C T G C A A C T G A T G C G C A T A T C G G T A C G T C A C T A G A T G C A C T G
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T