Information for 8-CGGGTTAGGT (Motif 14)

A T G C C A T G T C A G C T A G C A G T A C G T G C T A C T A G C T A G A C G T
Reverse Opposite:
T G C A G A T C A G T C C G A T T G C A G T C A A G T C A G T C G T A C T A C G
p-value:1e-9
log p-value:-2.166e+01
Information Content per bp:1.685
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.22%
Number of Background Sequences with motif179.6
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets44.0 +/- 24.8bp
Average Position of motif in Background51.8 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGGGTTAGGT
-GGATTAGC-
 A T G C C A T G T C A G C T A G C A G T A C G T G C T A C T A G C T A G A C G T
A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CGGGTTAGGT--
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T A T G C C A T G T C A G C T A G C A G T A C G T G C T A C T A G C T A G A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CGGGTTAGGT--
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T A T G C C A T G T C A G C T A G C A G T A C G T G C T A C T A G C T A G A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PB0185.1_Tcf1_2/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CGGGTTAGGT
TTGCCCGGATTAGG-
 A C G T A C G T A C G T A C G T A C G T A T G C C A T G T C A G C T A G C A G T A C G T G C T A C T A G C T A G A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G A C G T

GSC2/MA0891.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGGGTTAGGT
GNGGATTAGN-
 A C G T A T G C C A T G T C A G C T A G C A G T A C G T G C T A C T A G C T A G A C G T
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T

GSC/MA0648.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGGGTTAGGT
NNGGATTAGN-
 A C G T A T G C C A T G T C A G C T A G C A G T A C G T G C T A C T A G C T A G A C G T
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T

OTX1/MA0711.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGGGTTAGGT
CGGATTAN--
 A T G C C A T G T C A G C T A G C A G T A C G T G C T A C T A G C T A G A C G T
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGGGTTAGGT
GGGATTANN-
 A T G C C A T G T C A G C T A G C A G T A C G T G C T A C T A G C T A G A C G T
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGGGTTAGGT
RGGATTAR--
 A T G C C A T G T C A G C T A G C A G T A C G T G C T A C T A G C T A G A C G T
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGGGTTAGGT
NGGATTAA--
 A T G C C A T G T C A G C T A G C A G T A C G T G C T A C T A G C T A G A C G T
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T