Information for 7-AAAAMCGTTT (Motif 13)

C T G A G T C A C G T A T G C A G T C A T G A C C A T G C A G T A C G T A C G T
Reverse Opposite:
G T C A T G C A G T C A G T A C A C T G C A G T A C G T A C G T A C G T A G C T
p-value:1e-9
log p-value:-2.180e+01
Information Content per bp:1.704
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.65%
Number of Background Sequences with motif255.8
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets47.3 +/- 30.9bp
Average Position of motif in Background48.5 +/- 37.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL1/MA0647.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AAAAMCGTTT--
AAAACCGGTTTT
 C T G A G T C A C G T A T G C A G T C A T G A C C A T G C A G T A C G T A C G T A C G T A C G T
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

TFCP2/MA0145.3/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AAAAMCGTTT-
-AAACCGGTTT
 C T G A G T C A C G T A T G C A G T C A T G A C C A T G C A G T A C G T A C G T A C G T
A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T

PH0044.1_Homez/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAAAMCGTTT-----
AAAACATCGTTTTTAAG
 A C G T A C G T C T G A G T C A C G T A T G C A G T C A T G A C C A T G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

PB0046.1_Mybl1_1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AAAAMCGTTT----
TTGAAAACCGTTAATTT
 A C G T A C G T A C G T C T G A G T C A C G T A T G C A G T C A T G A C C A T G C A G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

PB0045.1_Myb_1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAAMCGTTT----
ATGGAAACCGTTATTTT
 A C G T A C G T A C G T C T G A G T C A C G T A T G C A G T C A T G A C C A T G C A G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAAAMCGTTT----
AAAAACCATTAAGG
 C T G A G T C A C G T A T G C A G T C A T G A C C A T G C A G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

BARHL2/MA0635.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AAAAMCGTTT---
---ANCGTTTANN
 C T G A G T C A C G T A T G C A G T C A T G A C C A T G C A G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

PH0006.1_Barhl2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAAAMCGTTT-----
AAAAACCAATTAAGAA
 A C G T C T G A G T C A C G T A T G C A G T C A T G A C C A T G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AAAAMCGTTT
--AACCGANA
 C T G A G T C A C G T A T G C A G T C A T G A C C A T G C A G T A C G T A C G T
A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

CLOCK/MA0819.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAAAMCGTTT-
-AACACGTGTT
 C T G A G T C A C G T A T G C A G T C A T G A C C A T G C A G T A C G T A C G T A C G T
A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T