Information for 3-CCCGGGTGCAGGGTGC (Motif 10)

A T G C G T A C A G T C C T A G C T A G A T C G A C G T A C T G A G T C C G T A C T A G C T A G A C T G A G C T A T C G A T G C
Reverse Opposite:
A T C G A T G C C T G A A G T C A G T C A G T C C G A T A C T G T A G C G T C A A T G C A G T C A G T C C T A G A C T G A T C G
p-value:1e-10
log p-value:-2.430e+01
Information Content per bp:1.763
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif14.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.4 +/- 21.6bp
Average Position of motif in Background55.1 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCCGGGTGCAGGGTGC-
-CANAGNNCAAAGTCCA
 A T G C G T A C A G T C C T A G C T A G A T C G A C G T A C T G A G T C C G T A C T A G C T A G A C T G A G C T A T C G A T G C A C G T
A C G T G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

Hnf4a/MA0114.3/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCCGGGTGCAGGGTGC---
---GGGGTCAAAGTCCAAT
 A T G C G T A C A G T C C T A G C T A G A T C G A C G T A C T G A G T C C G T A C T A G C T A G A C T G A G C T A T C G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCCGGGTGCAGGGTGC-
--AGAGTCCAAAGTCCA
 A T G C G T A C A G T C C T A G C T A G A T C G A C G T A C T G A G T C C G T A C T A G C T A G A C T G A G C T A T C G A T G C A C G T
A C G T A C G T C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CCCGGGTGCAGGGTGC
---GGGGGCGGGGCC-
 A T G C G T A C A G T C C T A G C T A G A T C G A C G T A C T G A G T C C G T A C T A G C T A G A C T G A G C T A T C G A T G C
A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

MTF1/MA0863.1/Jaspar

Match Rank:5
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CCCGGGTGCAGGGTGC---
-----GTGCCGTGTGCAAA
 A T G C G T A C A G T C C T A G C T A G A T C G A C G T A C T G A G T C C G T A C T A G C T A G A C T G A G C T A T C G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

NR2C2/MA0504.1/Jaspar

Match Rank:6
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CCCGGGTGCAGGGTGC-
--AGGGGTCAGAGGTCA
 A T G C G T A C A G T C C T A G C T A G A T C G A C G T A C T G A G T C C G T A C T A G C T A G A C T G A G C T A T C G A T G C A C G T
A C G T A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CCCGGGTGCAGGGTGC
----AGGTCAAGGTCA
 A T G C G T A C A G T C C T A G C T A G A T C G A C G T A C T G A G T C C G T A C T A G C T A G A C T G A G C T A T C G A T G C
A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

PB0044.1_Mtf1_1/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CCCGGGTGCAGGGTGC
GGGCCGTGTGCAAAAA--
 A C G T A C G T A T G C G T A C A G T C C T A G C T A G A T C G A C G T A C T G A G T C C G T A C T A G C T A G A C T G A G C T A T C G A T G C
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CCCGGGTGCAGGGTGC-
-NNAGGGGCGGGGTNNA
 A T G C G T A C A G T C C T A G C T A G A T C G A C G T A C T G A G T C C G T A C T A G C T A G A C T G A G C T A T C G A T G C A C G T
A C G T G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CCCGGGTGCAGGGTGC--
-NNNANTGCAGTGCNNTT
 A T G C G T A C A G T C C T A G C T A G A T C G A C G T A C T G A G T C C G T A C T A G C T A G A C T G A G C T A T C G A T G C A C G T A C G T
A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T