Information for 1-TCCCAGACACAGC (Motif 1)

A C G T A G T C G T A C A G T C C T G A A C T G C T G A A G T C C G T A G T A C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A C G T A C T G A G C T A G T C A G C T A C T G A C T G A C T G C G T A
p-value:1e-13
log p-value:-3.092e+01
Information Content per bp:1.900
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.4 +/- 27.2bp
Average Position of motif in Background48.9 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCCCAGACACAGC--
TCCCAGMCRAGCCCC
 A C G T A G T C G T A C A G T C C T G A A C T G C T G A A G T C C G T A G T A C C G T A A C T G A G T C A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TCCCAGACACAGC
--CCAGACAG---
 A C G T A G T C G T A C A G T C C T G A A C T G C T G A A G T C C G T A G T A C C G T A A C T G A G T C
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCCCAGACACAGC
--CCAGGAACAG-
 A C G T A G T C G T A C A G T C C T G A A C T G C T G A A G T C C G T A G T A C C G T A A C T G A G T C
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCCCAGACACAGC
TGCCCAGNHW----
 A C G T A C G T A G T C G T A C A G T C C T G A A C T G C T G A A G T C C G T A G T A C C G T A A C T G A G T C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCCCAGACACAGC-
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A G T C G T A C A G T C C T G A A C T G C T G A A G T C C G T A G T A C C G T A A C T G A G T C A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCCCAGACACAGC
--CCAGACRSVB-
 A C G T A G T C G T A C A G T C C T G A A C T G C T G A A G T C C G T A G T A C C G T A A C T G A G T C
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCCCAGACACAGC
--BCAGACWA---
 A C G T A G T C G T A C A G T C C T G A A C T G C T G A A G T C C G T A G T A C C G T A A C T G A G T C
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:TCCCAGACACAGC
-------CACAGN
 A C G T A G T C G T A C A G T C C T G A A C T G C T G A A G T C C G T A G T A C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TCCCAGACACAGC
HTTTCCCASG------
 A C G T A C G T A C G T A C G T A G T C G T A C A G T C C T G A A C T G C T G A A G T C C G T A G T A C C G T A A C T G A G T C
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCCCAGACACAGC
ATGCCAGACN----
 A C G T A C G T A G T C G T A C A G T C C T G A A C T G C T G A A G T C C G T A G T A C C G T A A C T G A G T C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T