Information for 6-BHTTTTBCTGTVBGTT (Motif 9)

A C T G G C T A A G C T A G C T A G C T A C G T A C T G A G T C A C G T A C T G A C G T T G C A A T C G C T A G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C T A G C A C G T C G T A G T A C C G T A C T A G T A G C C G T A C T G A T C G A C T G A C A G T T A G C
p-value:1e-7
log p-value:-1.775e+01
Information Content per bp:1.732
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif3.42%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets61.2 +/- 26.0bp
Average Position of motif in Background51.8 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:BHTTTTBCTGTVBGTT---
--------TGTGGATTNNN
 A C T G G C T A A G C T A G C T A G C T A C G T A C T G A G T C A C G T A C T G A C G T T G C A A T C G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.63
Offset:6
Orientation:forward strand
Alignment:BHTTTTBCTGTVBGTT
------GCTGTG----
 A C T G G C T A A G C T A G C T A G C T A C G T A C T G A G T C A C G T A C T G A C G T T G C A A T C G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:BHTTTTBCTGTVBGTT
--ATTTCCTGTN----
 A C T G G C T A A G C T A G C T A G C T A C G T A C T G A G T C A C G T A C T G A C G T T G C A A T C G C T A G A C G T A C G T
A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:6
Orientation:forward strand
Alignment:BHTTTTBCTGTVBGTT--
------NNTGTGGATTSS
 A C T G G C T A A G C T A G C T A G C T A C G T A C T G A G T C A C G T A C T G A C G T T G C A A T C G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:BHTTTTBCTGTVBGTT
--ACTTCCTGTT----
 A C T G G C T A A G C T A G C T A G C T A C G T A C T G A G T C A C G T A C T G A C G T T G C A A T C G C T A G A C G T A C G T
A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:BHTTTTBCTGTVBGTT
-CACTTCCTGT-----
 A C T G G C T A A G C T A G C T A G C T A C G T A C T G A G T C A C G T A C T G A C G T T G C A A T C G C T A G A C G T A C G T
A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:BHTTTTBCTGTVBGTT
--ATTTCCTGTN----
 A C T G G C T A A G C T A G C T A G C T A C G T A C T G A G T C A C G T A C T G A C G T T G C A A T C G C T A G A C G T A C G T
A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.58
Offset:5
Orientation:forward strand
Alignment:BHTTTTBCTGTVBGTT
-----GTCTGTGGTTT
 A C T G G C T A A G C T A G C T A G C T A C G T A C T G A G T C A C G T A C T G A C G T T G C A A T C G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.57
Offset:8
Orientation:forward strand
Alignment:BHTTTTBCTGTVBGTT
--------TGTCGGTT
 A C T G G C T A A G C T A G C T A G C T A C G T A C T G A G T C A C G T A C T G A C G T T G C A A T C G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:BHTTTTBCTGTVBGTT
CCCCCTGCTGTG----
 A C T G G C T A A G C T A G C T A G C T A C G T A C T G A G T C A C G T A C T G A C G T T G C A A T C G C T A G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T