Information for 9-CCCCACTGCGAGT (Motif 19)

A T G C A G T C A G T C A G T C C G T A A G T C A C G T A C T G A T G C A C T G C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A G T C A T C G A G T C C G T A A C T G A C G T A C T G A C T G A C T G A T C G
p-value:1e-5
log p-value:-1.275e+01
Information Content per bp:1.958
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 25.6bp
Average Position of motif in Background20.1 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC3/MA0697.1/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCCCACTGCGAGT
GACCCCCCGCTGCGC--
 A C G T A C G T A C G T A C G T A T G C A G T C A G T C A G T C C G T A A G T C A C G T A C T G A T G C A C T G C G T A A C T G A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCCCACTGCGAGT
GACCCCCCGCTGTGC--
 A C G T A C G T A C G T A C G T A T G C A G T C A G T C A G T C C G T A A G T C A C G T A C T G A T G C A C T G C G T A A C T G A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCCCACTGCGAGT
GACCCCCCGCTGTG---
 A C G T A C G T A C G T A C G T A T G C A G T C A G T C A G T C C G T A A G T C A C G T A C T G A T G C A C T G C G T A A C T G A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCCCACTGCGAGT---
-NNNACCGAGAGTNNN
 A T G C A G T C A G T C A G T C C G T A A G T C A C G T A C T G A T G C A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCCCACTGCGAGT
-CCTGCTGAGH--
 A T G C A G T C A G T C A G T C C G T A A G T C A C G T A C T G A T G C A C T G C G T A A C T G A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCCCACTGCGAGT
TCNCCTGCTGNGNNN
 A C G T A C G T A T G C A G T C A G T C A G T C C G T A A G T C A C G T A C T G A T G C A C T G C G T A A C T G A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCCCACTGCGAGT
GGCCYCCTGCTGDGH--
 A C G T A C G T A C G T A C G T A T G C A G T C A G T C A G T C C G T A A G T C A C G T A C T G A T G C A C T G C G T A A C T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCCCACTGCGAGT
TNTCCTGCTGTGNNG
 A C G T A C G T A T G C A G T C A G T C A G T C C G T A A G T C A C G T A C T G A T G C A C T G C G T A A C T G A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCCCACTGCGAGT--
AATCGCACTGCATTCCG
 A C G T A C G T A T G C A G T C A G T C A G T C C G T A A G T C A C G T A C T G A T G C A C T G C G T A A C T G A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCCCACTGCGAGT--
CAATCACTGGCAGAAT
 A C G T A T G C A G T C A G T C A G T C C G T A A G T C A C G T A C T G A T G C A C T G C G T A A C T G A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T