Information for 4-GTTTGTCTTAACT (Motif 9)

A C T G A C G T A C G T A C G T A C T G G C A T A G T C A G C T A C G T C G T A G T C A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C G T C G T A C T G A A C T G C G T A A G T C C G T A C G T A C G T A A G T C
p-value:1e-9
log p-value:-2.269e+01
Information Content per bp:1.944
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets71.0 +/- 33.5bp
Average Position of motif in Background29.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0032.1_IRC900814_1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTTTGTCTTAACT
GNNATTTGTCGTAANN
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G G C A T A G T C A G C T A C G T C G T A G T C A A G T C A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

Mecom/MA0029.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTTTGTCTTAACT-
TNTTATCTTATCTT
 A C T G A C G T A C G T A C G T A C T G G C A T A G T C A G C T A C G T C G T A G T C A A G T C A C G T A C G T
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T

GATA3/MA0037.2/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GTTTGTCTTAACT
-----TCTTATCT
 A C T G A C G T A C G T A C G T A C T G G C A T A G T C A G C T A C G T C G T A G T C A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T

Gata4/MA0482.1/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GTTTGTCTTAACT---
-----TCTTATCTCCC
 A C T G A C G T A C G T A C G T A C T G G C A T A G T C A G C T A C G T C G T A G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTTTGTCTTAACT
CCTTTGTTTT----
 A C G T A C T G A C G T A C G T A C G T A C T G G C A T A G T C A G C T A C G T C G T A G T C A A G T C A C G T
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GTTTGTCTTAACT--
-----YCTTATCTBN
 A C T G A C G T A C G T A C G T A C T G G C A T A G T C A G C T A C G T C G T A G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C

Gata1/MA0035.3/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GTTTGTCTTAACT--
----TTCTTATCTGT
 A C T G A C G T A C G T A C G T A C T G G C A T A G T C A G C T A C G T C G T A G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GTTTGTCTTAACT-
----NCCTTATCTG
 A C T G A C G T A C G T A C G T A C T G G C A T A G T C A G C T A C G T C G T A G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GTTTGTCTTAACT-
----NNCTTATCTN
 A C T G A C G T A C G T A C G T A C T G G C A T A G T C A G C T A C G T C G T A G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C

HMBOX1/MA0895.1/Jaspar

Match Rank:10
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GTTTGTCTTAACT---
------GTTAACTAGN
 A C T G A C G T A C G T A C G T A C T G G C A T A G T C A G C T A C G T C G T A G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T