Information for 8-GACCTGACTA (Motif 29)

A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T G T A C C G T A A C T G A C T G A C G T A G T C
p-value:1e-3
log p-value:-9.062e+00
Information Content per bp:1.957
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.2 +/- 23.1bp
Average Position of motif in Background48.7 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GACCTGACTA
TGACCTYA---
 A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GACCTGACTA
TGACCT-----
 A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GACCTGACTA--
TTGACCTANTTATN
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GACCTGACTA
TGACCTTGAT-
 A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GACCTGACTA---
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GACCTGACTA
GTGACCTT----
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACCTGACTA
TGACCTARTT-
 A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GACCTGACTA-
NNCNTGACCCCGCTCT
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GACCTGACTA-----
GCAACCTCATTATNNNN
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GACCTGACTA-----
NNNACCTCATTATCNTN
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C