Information for 7-GAGAGAGCGA (Motif 28)

A C T G C T G A A C T G C G T A A C T G C T G A A C T G G T A C C T A G C G T A
Reverse Opposite:
A C G T A G T C A C T G A G T C A G C T A G T C A C G T A G T C A G C T G T A C
p-value:1e-4
log p-value:-9.804e+00
Information Content per bp:1.879
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.06%
Number of Background Sequences with motif123.5
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets39.4 +/- 24.7bp
Average Position of motif in Background51.1 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GAGAGAGCGA
NNNACCGAGAGTNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A A C T G C G T A A C T G C T G A A C T G G T A C C T A G C G T A
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GAGAGAGCGA--
--GAGSCCGAGC
 A C T G C T G A A C T G C G T A A C T G C T G A A C T G G T A C C T A G C G T A A C G T A C G T
A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

PB0114.1_Egr1_2/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAGAGAGCGA----
TGCGGAGTGGGACTGG
 A C G T A C G T A C T G C T G A A C T G C G T A A C T G C T G A A C T G G T A C C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAGAGAGCGA
TGCGTGGGYG-
 A C G T A C T G C T G A A C T G C G T A A C T G C T G A A C T G G T A C C T A G C G T A
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GAGAGAGCGA
GNNACCGAGAATNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A A C T G C G T A A C T G C T G A A C T G G T A C C T A G C G T A
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAGAGAGCGA---------
-GGAAAGCGAAACCAAAAC
 A C T G C T G A A C T G C G T A A C T G C T G A A C T G G T A C C T A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

PRDM1/MA0508.1/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GAGAGAGCGA
AGAAAGTGAAAGTGA
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A A C T G C G T A A C T G C T G A A C T G G T A C C T A G C G T A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PB0010.1_Egr1_1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GAGAGAGCGA-
ANTGCGGGGGCGGN
 A C G T A C G T A C G T A C T G C T G A A C T G C G T A A C T G C T G A A C T G G T A C C T A G C G T A A C G T
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------GAGAGAGCGA
TTGACCGAGAATTCC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A A C T G C G T A A C T G C T G A A C T G G T A C C T A G C G T A
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GAGAGAGCGA----
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C T G C T G A A C T G C G T A A C T G C T G A A C T G G T A C C T A G C G T A A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C