Information for 5-GGATCTGTGA (Motif 24)

C T A G C T A G C G T A A C G T G T A C A G C T A C T G A C G T A T C G C G T A
Reverse Opposite:
A C G T A T G C C G T A G T A C C T G A A C T G C G T A A C G T A G T C A G T C
p-value:1e-4
log p-value:-1.148e+01
Information Content per bp:1.879
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif36.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets45.3 +/- 27.2bp
Average Position of motif in Background45.8 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0140.1_Pknox1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGATCTGTGA----
AAAGACCTGTCAATCC
 A C G T A C G T C T A G C T A G C G T A A C G T G T A C A G C T A C T G A C G T A T C G C G T A A C G T A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0102.1_Meis1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGATCTGTGA----
AACGAGCTGTCAATAC
 A C G T A C G T C T A G C T A G C G T A A C G T G T A C A G C T A C T G A C G T A T C G C G T A A C G T A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0104.1_Meis2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGATCTGTGA----
AAAGACCTGTCAATAC
 A C G T A C G T C T A G C T A G C G T A A C G T G T A C A G C T A C T G A C G T A T C G C G T A A C G T A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGATCTGTGA-
-AAGGTGTKAA
 C T A G C T A G C G T A A C G T G T A C A G C T A C T G A C G T A T C G C G T A A C G T
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGATCTGTGA----
AAGCACCTGTCAATAT
 A C G T A C G T C T A G C T A G C G T A A C G T G T A C A G C T A C T G A C G T A T C G C G T A A C G T A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGATCTGTGA
--AGGTGTGA
 C T A G C T A G C G T A A C G T G T A C A G C T A C T G A C G T A T C G C G T A
A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGATCTGTGA--
--AGGTGTGAAM
 C T A G C T A G C G T A A C G T G T A C A G C T A C T G A C G T A T C G C G T A A C G T A C G T
A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

PH0169.1_Tgif1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGATCTGTGA-----
NNNCAGCTGTCAATATN
 A C G T A C G T C T A G C T A G C G T A A C G T G T A C A G C T A C T G A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGATCTGTGA----
AATTACCTGTCAATAC
 A C G T A C G T C T A G C T A G C G T A A C G T G T A C A G C T A C T G A C G T A T C G C G T A A C G T A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0170.1_Tgif2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGATCTGTGA----
AACTAGCTGTCAATAC
 A C G T A C G T C T A G C T A G C G T A A C G T G T A C A G C T A C T G A C G T A T C G C G T A A C G T A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C