Information for 15-GGCAAAAAGCCGC (Motif 23)

A C T G A C T G A G T C C G T A C T G A G T C A C G T A C G T A A C T G A G T C A G T C A T C G G T A C
Reverse Opposite:
A C T G A T G C C T A G A C T G A G T C A C G T A C G T A C G T A G C T A C G T A C T G A G T C A G T C
p-value:1e-5
log p-value:-1.314e+01
Information Content per bp:1.888
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.7 +/- 23.6bp
Average Position of motif in Background40.8 +/- 3.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGCAAAAAGCCGC
TGGCACCATGCCAA
 A C G T A C T G A C T G A G T C C G T A C T G A G T C A C G T A C G T A A C T G A G T C A G T C A T C G G T A C
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGCAAAAAGCCGC-
TTGGCANNNTGCCAAG
 A C G T A C G T A C T G A C T G A G T C C G T A C T G A G T C A C G T A C G T A A C T G A G T C A G T C A T C G G T A C A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGCAAAAAGCCGC
CTGGCAGNCTGCCA-
 A C G T A C G T A C T G A C T G A G T C C G T A C T G A G T C A C G T A C G T A A C T G A G T C A G T C A T C G G T A C
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GGCAAAAAGCCGC
CAATTGCAAAAATAT--
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C T G A G T C A C G T A C G T A A C T G A G T C A G T C A T C G G T A C
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGCAAAAAGCCGC
GGAACAAAGR---
 A C T G A C T G A G T C C G T A C T G A G T C A C G T A C G T A A C T G A G T C A G T C A T C G G T A C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGCAAAAAGCCGC----
---AAAAAGCGGAAGTA
 A C T G A C T G A G T C C G T A C T G A G T C A C G T A C G T A A C T G A G T C A G T C A T C G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GGCAAAAAGCCGC
TNNGGGCAG--------
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C T G A G T C A C G T A C G T A A C T G A G T C A G T C A T C G G T A C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GGCAAAAAGCCGC
------CAGCC--
 A C T G A C T G A G T C C G T A C T G A G T C A C G T A C G T A A C T G A G T C A G T C A T C G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGCAAAAAGCCGC
VRRACAAWGG---
 A C T G A C T G A G T C C G T A C T G A G T C A C G T A C G T A A C T G A G T C A G T C A T C G G T A C
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GGCAAAAAGCCGC
CTTGGCAA--------
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A C T G A G T C A C G T A C G T A A C T G A G T C A G T C A T C G G T A C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T