Information for 14-GAGTCTTGCTGTG (Motif 22)

A C T G C T G A C T A G A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A T C G
Reverse Opposite:
A T G C C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C T G C G T A A G T C A G C T A G T C
p-value:1e-6
log p-value:-1.435e+01
Information Content per bp:1.945
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.2 +/- 35.5bp
Average Position of motif in Background38.0 +/- 8.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GAGTCTTGCTGTG---
-NNTCCTGCTGTGNNN
 A C T G C T G A C T A G A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A T C G A C G T A C G T A C G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GAGTCTTGCTGTG---
-TNTCCTGCTGTGNNG
 A C T G C T G A C T A G A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A T C G A C G T A C G T A C G T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GAGTCTTGCTGTG---
-TCNCCTGCTGNGNNN
 A C T G C T G A C T A G A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A T C G A C G T A C G T A C G T
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAGTCTTGCTGTG-
GGCCYCCTGCTGDGH
 A C G T A C T G C T G A C T A G A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A T C G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GAGTCTTGCTGTG-
----CCTGCTGAGH
 A C T G C T G A C T A G A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GAGTCTTGCTGTG
-CCCCCTGCTGTG
 A C T G C T G A C T A G A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A T C G
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0120.1_Foxj1_2/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GAGTCTTGCTGTG----
--GTNTTGTTGTGANNT
 A C T G C T G A C T A G A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.61
Offset:7
Orientation:forward strand
Alignment:GAGTCTTGCTGTG
-------GCTGTG
 A C T G C T G A C T A G A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GAGTCTTGCTGTG
---ACTTCCTGTT
 A C T G C T G A C T A G A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A T C G
A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GAGTCTTGCTGTG
--CACTTCCTGT-
 A C T G C T G A C T A G A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A T C G
A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T