Information for 12-SRKTGTTAATRCG (Motif 18)

T A C G C T A G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C C T A G
Reverse Opposite:
A G T C A C T G A G C T C G T A A C G T A C G T C G T A C G T A A G T C C G T A G T A C A G T C A T C G
p-value:1e-7
log p-value:-1.642e+01
Information Content per bp:1.861
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.2 +/- 22.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:SRKTGTTAATRCG
AGGTGTTAAT---
 T A C G C T A G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C C T A G
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:SRKTGTTAATRCG-----
-NTTGTTAATCCCTCTNN
 T A C G C T A G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PB0187.1_Tcf7_2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-SRKTGTTAATRCG-
NNNTTTNTAATACNG
 A C G T T A C G C T A G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C C T A G A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PH0123.1_Obox3/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:SRKTGTTAATRCG-----
-ATAGTTAATCCCCCNNA
 T A C G C T A G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

Foxj2/MA0614.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:SRKTGTTAATRCG
--TTGTTTAC---
 T A C G C T A G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C C T A G
A C G T A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:SRKTGTTAATRCG----
AATCGTTAATCCCTTTA
 T A C G C T A G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C C T A G A C G T A C G T A C G T A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

OTX1/MA0711.1/Jaspar

Match Rank:7
Score:0.63
Offset:5
Orientation:forward strand
Alignment:SRKTGTTAATRCG
-----TTAATCCG
 T A C G C T A G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C C T A G
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:SRKTGTTAATRCG
TATTGTTTATT--
 T A C G C T A G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C C T A G
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.63
Offset:4
Orientation:forward strand
Alignment:SRKTGTTAATRCG-
----GCTAATCCCC
 T A C G C T A G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C C T A G A C G T
A C G T A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.63
Offset:5
Orientation:forward strand
Alignment:SRKTGTTAATRCG
-----TTAATCCT
 T A C G C T A G C A G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T C T G A A G T C C T A G
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T