Information for 1-GTCGATTTAG (Motif 16)

A C T G A C G T T A G C A C T G C G T A A C G T A C G T A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A C G T A C G T A A C G T A G T C A C T G C G T A A G T C
p-value:1e-7
log p-value:-1.772e+01
Information Content per bp:1.945
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets29.2 +/- 19.7bp
Average Position of motif in Background59.8 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTCGATTTAG
TGTGGATTNNN
 A C G T A C T G A C G T T A G C A C T G C G T A A C G T A C G T A C G T C G T A A C T G
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTCGATTTAG
NNTGTGGATTSS-
 A C G T A C G T A C G T A C T G A C G T T A G C A C T G C G T A A C G T A C G T A C G T C G T A A C T G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTCGATTTAG----
-NTGATTTATGGCC
 A C T G A C G T T A G C A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

ONECUT1/MA0679.1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTCGATTTAG-
ANTATCGATTTTTN
 A C G T A C G T A C G T A C T G A C G T T A G C A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C G T
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTCGATTTAG
CNGTGATTTN-
 A C G T A C T G A C G T T A G C A C T G C G T A A C G T A C G T A C G T C G T A A C T G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTCGATTTAG----
--TGATTTATGGCC
 A C T G A C G T T A G C A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

ONECUT2/MA0756.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTCGATTTAG-
ATTATCGATTTTTT
 A C G T A C G T A C G T A C T G A C G T T A G C A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C G T
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

PH0026.1_Duxbl/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GTCGATTTAG---
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A C G T A C T G A C G T T A G C A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTCGATTTAG----
--TGATTTATGGCC
 A C T G A C G T T A G C A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

PB0179.1_Sp100_2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTCGATTTAG--
TCCGTCGCTTAAAAG
 A C G T A C G T A C G T A C T G A C G T T A G C A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G