Information for 5-RCCTTATTCAACATCA (Motif 6)

C T G A A G T C A G T C A C G T A G C T C G T A A G C T C G A T G T A C G C T A C G T A A G T C G T C A A C G T T G A C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C G T A C T G A C G T C G A T C A T G C G T A C T G A A C G T C T G A C G T A C T A G A C T G A G C T
p-value:1e-14
log p-value:-3.339e+01
Information Content per bp:1.796
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.7 +/- 27.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:RCCTTATTCAACATCA
-CCGTATTATAAACAA
 C T G A A G T C A G T C A C G T A G C T C G T A A G C T C G A T G T A C G C T A C G T A A G T C G T C A A C G T T G A C C G T A
A C G T G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

HLF/MA0043.2/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:RCCTTATTCAACATCA
-CATTACGTAACC---
 C T G A A G T C A G T C A C G T A G C T C G T A A G C T C G A T G T A C G C T A C G T A A G T C G T C A A C G T T G A C C G T A
A C G T G A T C T C G A G C A T A C G T C T G A A G T C T C A G G A C T G T C A C G T A A G T C G T A C A C G T A C G T A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:3
Score:0.52
Offset:3
Orientation:forward strand
Alignment:RCCTTATTCAACATCA
---TTATGTAACAT--
 C T G A A G T C A G T C A C G T A G C T C G T A A G C T C G A T G T A C G C T A C G T A A G T C G T C A A C G T T G A C C G T A
A C G T A C G T A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:RCCTTATTCAACATCA
--RTTATGYAAB----
 C T G A A G T C A G T C A C G T A G C T C G T A A G C T C G A T G T A C G C T A C G T A A G T C G T C A A C G T T G A C C G T A
A C G T A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C A C G T A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:RCCTTATTCAACATCA
----------ACGTCA
 C T G A A G T C A G T C A C G T A G C T C G T A A G C T C G A T G T A C G C T A C G T A A G T C G T C A A C G T T G A C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.49
Offset:2
Orientation:forward strand
Alignment:RCCTTATTCAACATCA
--TCCAATCCACA---
 C T G A A G T C A G T C A C G T A G C T C G T A A G C T C G A T G T A C G C T A C G T A A G T C G T C A A C G T T G A C C G T A
A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:7
Score:0.49
Offset:6
Orientation:forward strand
Alignment:RCCTTATTCAACATCA-------
------TCACCCATCAATAAACA
 C T G A A G T C A G T C A C G T A G C T C G T A A G C T C G A T G T A C G C T A C G T A A G T C G T C A A C G T T G A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

TEF/MA0843.1/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:RCCTTATTCAACATCA
-TATTACGTAACA---
 C T G A A G T C A G T C A C G T A G C T C G T A A G C T C G A T G T A C G C T A C G T A A G T C G T C A A C G T T G A C C G T A
A C G T A G C T T C G A G C A T C G A T C T G A G A T C C T A G A G C T G C T A C T G A A G T C T G C A A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:9
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:RCCTTATTCAACATCA
-NCTAAGTAAACA---
 C T G A A G T C A G T C A C G T A G C T C G T A A G C T C G A T G T A C G C T A C G T A A G T C G T C A A C G T T G A C C G T A
A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---RCCTTATTCAACATCA
GCAACCTCATTATNNNN--
 A C G T A C G T A C G T C T G A A G T C A G T C A C G T A G C T C G T A A G C T C G A T G T A C G C T A C G T A A G T C G T C A A C G T T G A C C G T A
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T A C G T A C G T