Information for 4-ATGTGTTCTCTGATGT (Motif 4)

T G C A A C G T A C T G C G A T C T A G A C G T G A C T G T A C G A C T A G T C A C G T A C T G G C T A A C G T A C T G A G C T
Reverse Opposite:
C T G A A G T C G T C A C A G T A G T C C G T A A C T G C G T A C A T G C G T A C G T A A G T C G C T A A G T C C G T A A C G T
p-value:1e-23
log p-value:-5.439e+01
Information Content per bp:1.788
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.9 +/- 28.1bp
Average Position of motif in Background33.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATGTGTTCTCTGATGT
NSTGTTTRCWCAGBNNN
 A C G T T G C A A C G T A C T G C G A T C T A G A C G T G A C T G T A C G A C T A G T C A C G T A C T G G C T A A C G T A C T G A G C T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

FOXA1/MA0148.3/Jaspar

Match Rank:2
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ATGTGTTCTCTGATGT
TCCATGTTTACTTTG----
 A C G T A C G T A C G T T G C A A C G T A C T G C G A T C T A G A C G T G A C T G T A C G A C T A G T C A C G T A C T G G C T A A C G T A C T G A G C T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:3
Score:0.51
Offset:2
Orientation:forward strand
Alignment:ATGTGTTCTCTGATGT---
--ATTTCCTTTGATCTATA
 T G C A A C G T A C T G C G A T C T A G A C G T G A C T G T A C G A C T A G T C A C G T A C T G G C T A A C G T A C T G A G C T A C G T A C G T A C G T
A C G T A C G T C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:ATGTGTTCTCTGATGT-
-----CCCCCTGCTGTG
 T G C A A C G T A C T G C G A T C T A G A C G T G A C T G T A C G A C T A G T C A C G T A C T G G C T A A C G T A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Foxa2/MA0047.2/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:ATGTGTTCTCTGATGT
-TGTTTACTTAGG---
 T G C A A C G T A C T G C G A T C T A G A C G T G A C T G T A C G A C T A G T C A C G T A C T G G C T A A C G T A C T G A G C T
A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:ATGTGTTCTCTGATGT---
--NNTTCCTTTGATCTNNA
 T G C A A C G T A C T G C G A T C T A G A C G T G A C T G T A C G A C T A G T C A C G T A C T G G C T A A C G T A C T G A G C T A C G T A C G T A C G T
A C G T A C G T C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:ATGTGTTCTCTGATGT---
---------ATGATGCAAT
 T G C A A C G T A C T G C G A T C T A G A C G T G A C T G T A C G A C T A G T C A C G T A C T G G C T A A C G T A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:ATGTGTTCTCTGATGT---
--NNTTCCTTTGATCTANA
 T G C A A C G T A C T G C G A T C T A G A C G T G A C T G T A C G A C T A G T C A C G T A C T G G C T A A C G T A C T G A G C T A C G T A C G T A C G T
A C G T A C G T C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.50
Offset:9
Orientation:forward strand
Alignment:ATGTGTTCTCTGATGT---
---------MTGATGCAAT
 T G C A A C G T A C T G C G A T C T A G A C G T G A C T G T A C G A C T A G T C A C G T A C T G G C T A A C G T A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:ATGTGTTCTCTGATGT-----
-NGTGTTCAVTSAAGCGKAAA
 T G C A A C G T A C T G C G A T C T A G A C G T G A C T G T A C G A C T A G T C A C G T A C T G G C T A A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T A C G C G A T T C A G A G C T A C G T G A T C C T G A T A G C A G C T A T G C C T G A C G T A A T C G A G T C C T A G A C T G C T G A G T C A T C G A