Information for 3-TGTGGGAAARMTTTTW (Motif 3)

A C G T A C T G G A C T T C A G C T A G C T A G C G T A C T G A C T G A C T A G G T A C A G C T A C G T A G C T A G C T C G A T
Reverse Opposite:
G C T A C T G A C T G A C G T A T C G A C A T G G A T C A G C T A G C T G C A T A G T C A G T C A G T C C G T A A G T C G T C A
p-value:1e-25
log p-value:-5.834e+01
Information Content per bp:1.697
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.41%
Number of Background Sequences with motif33.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets48.2 +/- 25.3bp
Average Position of motif in Background50.7 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGTGGGAAARMTTTTW
CSTGGGAAAD------
 A C G T A C T G G A C T T C A G C T A G C T A G C G T A C T G A C T G A C T A G G T A C A G C T A C G T A G C T A G C T C G A T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGTGGGAAARMTTTTW
NATGGAAAAN------
 A C G T A C T G G A C T T C A G C T A G C T A G C G T A C T G A C T G A C T A G G T A C A G C T A C G T A G C T A G C T C G A T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGTGGGAAARMTTTTW
TAAAGTCGTAAAACGT---
 A C G T A C G T A C G T A C G T A C T G G A C T T C A G C T A G C T A G C G T A C T G A C T G A C T A G G T A C A G C T A C G T A G C T A G C T C G A T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGTGGGAAARMTTTTW
NATGTTGCAA--------
 A C G T A C G T A C G T A C T G G A C T T C A G C T A G C T A G C G T A C T G A C T G A C T A G G T A C A G C T A C G T A G C T A G C T C G A T
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGTGGGAAARMTTTTW
--TGGAAAA-------
 A C G T A C T G G A C T T C A G C T A G C T A G C G T A C T G A C T G A C T A G G T A C A G C T A C G T A G C T A G C T C G A T
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TGTGGGAAARMTTTTW
TAAGGTCGTAAAATCCT--
 A C G T A C G T A C G T A C G T A C T G G A C T T C A G C T A G C T A G C G T A C T G A C T G A C T A G G T A C A G C T A C G T A G C T A G C T C G A T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T A C G T A C G T

PH0047.1_Hoxa11/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TGTGGGAAARMTTTTW
TAAAGTCGTAAAACAT---
 A C G T A C G T A C G T A C G T A C T G G A C T T C A G C T A G C T A G C G T A C T G A C T G A C T A G G T A C A G C T A C G T A G C T A G C T C G A T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T A C G T A C G T A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TGTGGGAAARMTTTTW
CAAGGTCGTAAAATCTT--
 A C G T A C G T A C G T A C G T A C T G G A C T T C A G C T A G C T A G C G T A C T G A C T G A C T A G G T A C A G C T A C G T A G C T A G C T C G A T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGTGGGAAARMTTTTW
GGCGGGAARN------
 A C G T A C T G G A C T T C A G C T A G C T A G C G T A C T G A C T G A C T A G G T A C A G C T A C G T A G C T A G C T C G A T
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TGTGGGAAARMTTTTW
GAAAAGGTGTGAAAATT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A C T T C A G C T A G C T A G C G T A C T G A C T G A C T A G G T A C A G C T A C G T A G C T A G C T C G A T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T A C G T A C G T A C G T A C G T