Information for 12-GCTHCTCAGGAHTGAH (Motif 27)

A C T G A G T C A C G T G A T C A G T C C G A T A T G C C G T A A C T G C T A G C G T A G A C T C G A T A T C G C G T A G A T C
Reverse Opposite:
C A T G A C G T A T G C C G T A C A G T A C G T G A T C A G T C A C G T A T C G C G T A A C T G C T A G C G T A A C T G T G A C
p-value:1e-7
log p-value:-1.828e+01
Information Content per bp:1.777
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets28.5 +/- 18.3bp
Average Position of motif in Background52.3 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCTHCTCAGGAHTGAH
-TTTCTNAGAAAN---
 A C T G A G T C A C G T G A T C A G T C C G A T A T G C C G T A A C T G C T A G C G T A G A C T C G A T A T C G C G T A G A T C
A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCTHCTCAGGAHTGAH
--TTCTNMGGAA----
 A C T G A G T C A C G T G A T C A G T C C G A T A T G C C G T A A C T G C T A G C G T A G A C T C G A T A T C G C G T A G A T C
A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCTHCTCAGGAHTGAH
ANTTCTCAGGAANNN-
 A C T G A G T C A C G T G A T C A G T C C G A T A T G C C G T A A C T G C T A G C G T A G A C T C G A T A T C G C G T A G A T C
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCTHCTCAGGAHTGAH
ATTTCCAAGAA-----
 A C T G A G T C A C G T G A T C A G T C C G A T A T G C C G T A A C T G C T A G C G T A G A C T C G A T A T C G C G T A G A T C
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T A C G T A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCTHCTCAGGAHTGAH
ANTTCTNNAGAA----
 A C T G A G T C A C G T G A T C A G T C C G A T A T G C C G T A A C T G C T A G C G T A G A C T C G A T A T C G C G T A G A T C
C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCTHCTCAGGAHTGAH
GCTTCC----------
 A C T G A G T C A C G T G A T C A G T C C G A T A T G C C G T A A C T G C T A G C G T A G A C T C G A T A T C G C G T A G A T C
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GCTHCTCAGGAHTGAH
-TTTCCCAGAAN----
 A C T G A G T C A C G T G A T C A G T C C G A T A T G C C G T A A C T G C T A G C G T A G A C T C G A T A T C G C G T A G A T C
A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GCTHCTCAGGAHTGAH--
------CGGAAGTGAAAC
 A C T G A G T C A C G T G A T C A G T C C G A T A T G C C G T A A C T G C T A G C G T A G A C T C G A T A T C G C G T A G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

Stat4/MA0518.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GCTHCTCAGGAHTGAH
-TTTCCAGGAAATGG-
 A C T G A G T C A C G T G A T C A G T C C G A T A T G C C G T A A C T G C T A G C G T A G A C T C G A T A T C G C G T A G A T C
A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GCTHCTCAGGAHTGAH
NGCTTTCTAGGAAN---
 A C G T A C T G A G T C A C G T G A T C A G T C C G A T A T G C C G T A A C T G C T A G C G T A G A C T C G A T A T C G C G T A G A T C
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T A C G T A C G T