Information for 6-GVAKGTGCAG (Motif 23)

C A T G T G A C G T C A C A T G C A T G C G A T C T A G T G A C C G T A A C T G
Reverse Opposite:
T G A C G C A T A C T G G A T C G C T A G T A C G T A C C A G T A C T G G T A C
p-value:1e-8
log p-value:-1.917e+01
Information Content per bp:1.465
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.95%
Number of Background Sequences with motif407.7
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets51.4 +/- 27.0bp
Average Position of motif in Background47.6 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GVAKGTGCAG
SDGCAGGTGCNS
 A C G T A C G T C A T G T G A C G T C A C A T G C A T G C G A T C T A G T G A C C G T A A C T G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GVAKGTGCAG
AACAGGTGT--
 A C G T C A T G T G A C G T C A C A T G C A T G C G A T C T A G T G A C C G T A A C T G
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GVAKGTGCAG
NNCAGGTGCG-
 A C G T C A T G T G A C G T C A C A T G C A T G C G A T C T A G T G A C C G T A A C T G
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T

ID4/MA0824.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GVAKGTGCAG
GACAGGTGTN-
 A C G T C A T G T G A C G T C A C A T G C A T G C G A T C T A G T G A C C G T A A C T G
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T

TCF3/MA0522.2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GVAKGTGCAG
NNCAGGTGTN-
 A C G T C A T G T G A C G T C A C A T G C A T G C G A T C T A G T G A C C G T A A C T G
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GVAKGTGCAG
NNCAGGTGNN-
 A C G T C A T G T G A C G T C A C A T G C A T G C G A T C T A G T G A C C G T A A C T G
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GVAKGTGCAG---
ATCCACAGGTGCGAAAA
 A C G T A C G T A C G T A C G T C A T G T G A C G T C A C A T G C A T G C G A T C T A G T G A C C G T A A C T G A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GVAKGTGCAG
VCAGGTRDRY
 C A T G T G A C G T C A C A T G C A T G C G A T C T A G T G A C C G T A A C T G
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GVAKGTGCAG--
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T A C G T C A T G T G A C G T C A C A T G C A T G C G A T C T A G T G A C C G T A A C T G A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GVAKGTGCAG--
TTCATTTGCATAT
 A C G T C A T G T G A C G T C A C A T G C A T G C G A T C T A G T G A C C G T A A C T G A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T