Information for 5-CWGTCGGTDA (Motif 22)

A G T C C G T A A C T G A G C T G T A C C T A G A T C G C G A T C A G T C G T A
Reverse Opposite:
C G A T G T C A C G T A A T G C A G T C A C T G C T G A A G T C C G A T A C T G
p-value:1e-8
log p-value:-1.954e+01
Information Content per bp:1.742
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif99.3
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets35.5 +/- 21.1bp
Average Position of motif in Background49.0 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CWGTCGGTDA
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G C T G T A C C T A G A T C G C G A T C A G T C G T A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0179.1_Sp100_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CWGTCGGTDA----
TCCGTCGCTTAAAAG
 A C G T A G T C C G T A A C T G A G C T G T A C C T A G A T C G C G A T C A G T C G T A A C G T A C G T A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

PB0150.1_Mybl1_2/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CWGTCGGTDA
CACGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G C T G T A C C T A G A T C G C G A T C A G T C G T A
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CWGTCGGTDA
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G C T G T A C C T A G A T C G C G A T C A G T C G T A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CWGTCGGTDA
DCTCAGCAGG---
 A C G T A C G T A C G T A G T C C G T A A C T G A G C T G T A C C T A G A T C G C G A T C A G T C G T A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CWGTCGGTDA
GCTGTG-----
 A C G T A G T C C G T A A C T G A G C T G T A C C T A G A T C G C G A T C A G T C G T A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CWGTCGGTDA
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G C T G T A C C T A G A T C G C G A T C A G T C G T A
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CWGTCGGTDA-
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G C T G T A C C T A G A T C G C G A T C A G T C G T A A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CWGTCGGTDA
CACAGCAGGGGG
 A C G T A C G T A G T C C G T A A C T G A G C T G T A C C T A G A T C G C G A T C A G T C G T A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CWGTCGGTDA--
DCHCAGCAGGRGGCC
 A C G T A C G T A C G T A G T C C G T A A C T G A G C T G T A C C T A G A T C G C G A T C A G T C G T A A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C