Information for 15-CTTTAGCCTCTCG (Motif 21)

A G T C A G C T A G C T A G C T C G T A A C T G A G T C G T A C C G A T A G T C A G C T A G T C A C T G
Reverse Opposite:
T G A C A C T G C T G A A C T G C G T A A C T G A C T G A G T C A C G T C T G A C T G A C T G A A C T G
p-value:1e-8
log p-value:-2.028e+01
Information Content per bp:1.840
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif9.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.8 +/- 18.8bp
Average Position of motif in Background64.0 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTTTAGCCTCTCG
GGCTCYAKCAYC---
 A C G T A C G T A G T C A G C T A G C T A G C T C G T A A C T G A G T C G T A C C G A T A G T C A G C T A G T C A C T G
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTTTAGCCTCTCG
---CAGCC-----
 A G T C A G C T A G C T A G C T C G T A A C T G A G T C G T A C C G A T A G T C A G C T A G T C A C T G
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTTTAGCCTCTCG--
----AGCCACTCAAG
 A G T C A G C T A G C T A G C T C G T A A C T G A G T C G T A C C G A T A G T C A G C T A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------CTTTAGCCTCTCG----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A G C T A G C T C G T A A C T G A G T C G T A C C G A T A G T C A G C T A G T C A C T G A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CTTTAGCCTCTCG
--BCAGACWA---
 A G T C A G C T A G C T A G C T C G T A A C T G A G T C G T A C C G A T A G T C A G C T A G T C A C T G
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CTTTAGCCTCTCG
TACCATAGCAACGGT
 A C G T A C G T A G T C A G C T A G C T A G C T C G T A A C T G A G T C G T A C C G A T A G T C A G C T A G T C A C T G
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CTTTAGCCTCTCG
WCATTTTGKCCTCYT-
 A C G T A C G T A C G T A G T C A G C T A G C T A G C T C G T A A C T G A G T C G T A C C G A T A G T C A G C T A G T C A C T G
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CTTTAGCCTCTCG-
----AASCACTCAA
 A G T C A G C T A G C T A G C T C G T A A C T G A G T C G T A C C G A T A G T C A G C T A G T C A C T G A C G T
A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CTTTAGCCTCTCG-----
--TAAGCCACTTGAAATT
 A G T C A G C T A G C T A G C T C G T A A C T G A G T C G T A C C G A T A G T C A G C T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----CTTTAGCCTCTCG
RSCACTYRAG-------
 A C G T A C G T A C G T A C G T A G T C A G C T A G C T A G C T C G T A A C T G A G T C G T A C C G A T A G T C A G C T A G T C A C T G
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T