Information for 2-AAAAAYCCTATGAATG (Motif 2)

C G T A C T G A G T C A C G T A C T G A A G T C A G T C A G T C A C G T C G T A A G C T T A C G T C G A C T G A A C G T A C T G
Reverse Opposite:
A G T C C G T A A G C T A G C T A G T C C T G A C G A T C G T A C T A G C T A G C T A G A G C T A C G T A C G T G A C T C G A T
p-value:1e-33
log p-value:-7.783e+01
Information Content per bp:1.813
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif3.77%
Number of Background Sequences with motif19.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets47.4 +/- 23.6bp
Average Position of motif in Background48.8 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AAAAAYCCTATGAATG-----
----NTTNTATGAATGTGNNC
 C G T A C T G A G T C A C G T A C T G A A G T C A G T C A G T C A C G T C G T A A G C T T A C G T C G A C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAAAAYCCTATGAATG
GATAACATCCTAGTAG--
 A C G T A C G T C G T A C T G A G T C A C G T A C T G A A G T C A G T C A G T C A C G T C G T A A G C T T A C G T C G A C T G A A C G T A C T G
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.53
Offset:6
Orientation:forward strand
Alignment:AAAAAYCCTATGAATG------
------ACTATGAATGAATGAT
 C G T A C T G A G T C A C G T A C T G A A G T C A G T C A G T C A C G T C G T A A G C T T A C G T C G A C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AAAAAYCCTATGAATG-
---NNTNTCATGAATGT
 C G T A C T G A G T C A C G T A C T G A A G T C A G T C A G T C A C G T C G T A A G C T T A C G T C G A C T G A A C G T A C T G A C G T
A C G T A C G T A C G T A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AAAAAYCCTATGAATG
--AAAAACCATTAAGG
 C G T A C T G A G T C A C G T A C T G A A G T C A G T C A G T C A C G T C G T A A G C T T A C G T C G A C T G A A C G T A C T G
A C G T A C G T T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

SOX21/MA0866.1/Jaspar

Match Rank:6
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:AAAAAYCCTATGAATG--
---AACACTACCATTGTT
 C G T A C T G A G T C A C G T A C T G A A G T C A G T C A G T C A C G T C G T A A G C T T A C G T C G A C T G A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.49
Offset:1
Orientation:forward strand
Alignment:AAAAAYCCTATGAATG
-TAATCCCN-------
 C G T A C T G A G T C A C G T A C T G A A G T C A G T C A G T C A C G T C G T A A G C T T A C G T C G A C T G A A C G T A C T G
A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.48
Offset:7
Orientation:forward strand
Alignment:AAAAAYCCTATGAATG
-------ATTTGAATT
 C G T A C T G A G T C A C G T A C T G A A G T C A G T C A G T C A C G T C G T A A G C T T A C G T C G A C T G A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

TATA-Box(TBP)/Promoter/Homer

Match Rank:9
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:AAAAAYCCTATGAATG-
-----GNCTATAAAAGG
 C G T A C T G A G T C A C G T A C T G A A G T C A G T C A G T C A C G T C G T A A G C T T A C G T C G A C T G A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:10
Score:0.47
Offset:0
Orientation:forward strand
Alignment:AAAAAYCCTATGAATG
NWTAAYCYAATCAWN-
 C G T A C T G A G T C A C G T A C T G A A G T C A G T C A G T C A C G T C G T A A G C T T A C G T C G A C T G A A C G T A C T G
C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T A C G T