Information for 10-SATSWYAASTWGCMAM (Motif 19)

A T G C C G T A A C G T A T C G C G A T A G T C C G T A C G T A A T G C A C G T C G T A A C T G A G T C G T A C C G T A T G C A
Reverse Opposite:
A C G T A C G T A C T G A C T G A G T C C G A T C G T A T A C G A C G T A C G T T C A G C G T A A T G C C G T A A C G T A T C G
p-value:1e-9
log p-value:-2.165e+01
Information Content per bp:1.805
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.4 +/- 22.2bp
Average Position of motif in Background50.7 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:SATSWYAASTWGCMAM
--TGGCACCATGCCAA
 A T G C C G T A A C G T A T C G C G A T A G T C C G T A C G T A A T G C A C G T C G T A A C T G A G T C G T A C C G T A T G C A
A C G T A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:SATSWYAASTWGCMAM-
GANGTTAACTAGTTTNN
 A T G C C G T A A C G T A T C G C G A T A G T C C G T A C G T A A T G C A C G T C G T A A C T G A G T C G T A C C G T A T G C A A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PH0111.1_Nkx2-2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-SATSWYAASTWGCMAM
NANTTTCAAGTGGTTAN
 A C G T A T G C C G T A A C G T A T C G C G A T A G T C C G T A C G T A A T G C A C G T C G T A A C T G A G T C G T A C C G T A T G C A
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PH0113.1_Nkx2-4/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:SATSWYAASTWGCMAM
AATTTCAAGTGGCTTN
 A T G C C G T A A C G T A T C G C G A T A G T C C G T A C G T A A T G C A C G T C G T A A C T G A G T C G T A C C G T A T G C A
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

Hoxb5/MA0904.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:SATSWYAASTWGCMAM-
-ACGGTAATTAGCTCAT
 A T G C C G T A A C G T A T C G C G A T A G T C C G T A C G T A A T G C A C G T C G T A A C T G A G T C G T A C C G T A T G C A A C G T
A C G T T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T

PH0060.1_Hoxb5/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:SATSWYAASTWGCMAM-
-ACGGTAATTAGCTCAT
 A T G C C G T A A C G T A T C G C G A T A G T C C G T A C G T A A T G C A C G T C G T A A C T G A G T C G T A C C G T A T G C A A C G T
A C G T T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T

PH0115.1_Nkx2-6/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:SATSWYAASTWGCMAM
AATNTTAAGTGGNTNN
 A T G C C G T A A C G T A T C G C G A T A G T C C G T A C G T A A T G C A C G T C G T A A C T G A G T C G T A C C G T A T G C A
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:SATSWYAASTWGCMAM-
-NNTGTAGGTAGCANNT
 A T G C C G T A A C G T A T C G C G A T A G T C C G T A C G T A A T G C A C G T C G T A A C T G A G T C G T A C C G T A T G C A A C G T
A C G T A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

LBX1/MA0618.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:SATSWYAASTWGCMAM
----TTAATTAG----
 A T G C C G T A A C G T A T C G C G A T A G T C C G T A C G T A A T G C A C G T C G T A A C T G A G T C G T A C C G T A T G C A
A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:SATSWYAASTWGCMAM-
-NNNTTAGGTAGCNTNT
 A T G C C G T A A C G T A T C G C G A T A G T C C G T A C G T A A T G C A C G T C G T A A C T G A G T C G T A C C G T A T G C A A C G T
A C G T A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T