Information for 13-TGGAAATGCTCCG (Motif 16)

A C G T A C T G A C T G C T G A C G T A C G T A A C G T A T C G A G T C A G C T A G T C A T G C C T A G
Reverse Opposite:
A G T C T A C G T C A G C T G A A C T G A T G C G T C A A C G T A C G T A G C T A G T C A G T C C G T A
p-value:1e-9
log p-value:-2.177e+01
Information Content per bp:1.797
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.3 +/- 17.8bp
Average Position of motif in Background50.6 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TGGAAATGCTCCG
-GGAAATTCCC--
 A C G T A C T G A C T G C T G A C G T A C G T A A C G T A T C G A G T C A G C T A G T C A T G C C T A G
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TGGAAATGCTCCG
-GGAAATCCCC--
 A C G T A C T G A C T G C T G A C G T A C G T A A C G T A T C G A G T C A G C T A G T C A T G C C T A G
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TGGAAATGCTCCG
-GGAAATTCCC--
 A C G T A C T G A C T G C T G A C G T A C G T A A C G T A T C G A G T C A G C T A G T C A T G C C T A G
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TGGAAATGCTCCG
-GGAAANCCCC--
 A C G T A C T G A C T G C T G A C G T A C G T A A C G T A T C G A G T C A G C T A G T C A T G C C T A G
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAATGCTCCG
NATGGAAAAN-----
 A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A C G T A T C G A G T C A G C T A G T C A T G C C T A G
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGGAAATGCTCCG
GGGAAATCCCCN-
 A C G T A C T G A C T G C T G A C G T A C G T A A C G T A T C G A G T C A G C T A G T C A T G C C T A G
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGGAAATGCTCCG
TGGAAAA------
 A C G T A C T G A C T G C T G A C G T A C G T A A C G T A T C G A G T C A G C T A G T C A T G C C T A G
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAATGCTCCG
NNTGGAAANN-----
 A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A C G T A T C G A G T C A G C T A G T C A T G C C T A G
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAATGCTCCG
AATGGAAAAT-----
 A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A C G T A T C G A G T C A G C T A G T C A T G C C T A G
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAATGCTCCG
AATGGAAAAT-----
 A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A C G T A T C G A G T C A G C T A G T C A T G C C T A G
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T