Information for 3-TCCCACASTC (Motif 12)

C G A T A T G C G A T C G A T C G C T A A G T C G C T A A T G C G C A T T A G C
Reverse Opposite:
A T C G C G T A T A C G C G A T T C A G C G A T C T A G C T A G A T C G G C T A
p-value:1e-10
log p-value:-2.480e+01
Information Content per bp:1.547
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif3.23%
Number of Background Sequences with motif187.4
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets40.2 +/- 22.0bp
Average Position of motif in Background47.5 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TCCCACASTC
NWAACCACADNN
 A C G T A C G T C G A T A T G C G A T C G A T C G C T A A G T C G C T A A T G C G C A T T A G C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TCCCACASTC
AAACCACAGAN
 A C G T C G A T A T G C G A T C G A T C G C T A A G T C G C T A A T G C G C A T T A G C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TCCCACASTC
ATCCAC----
 C G A T A T G C G A T C G A T C G C T A A G T C G C T A A T G C G C A T T A G C
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCCCACASTC
NAAACCACAG--
 A C G T A C G T C G A T A T G C G A T C G A T C G C T A A G T C G C T A A T G C G C A T T A G C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCCCACASTC--
GGCCACACCCAN
 C G A T A T G C G A T C G A T C G C T A A G T C G C T A A T G C G C A T T A G C A C G T A C G T
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCCCACASTC-
-GCCACACCCA
 C G A T A T G C G A T C G A T C G C T A A G T C G C T A A T G C G C A T T A G C A C G T
A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

GLI2/MA0734.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCCCACASTC
GCGACCACACTG
 A C G T A C G T C G A T A T G C G A T C G A T C G C T A A G T C G C T A A T G C G C A T T A G C
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCCCACASTC
AAACCACAGC-
 A C G T C G A T A T G C G A T C G A T C G C T A A G T C G C T A A T G C G C A T T A G C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCCCACASTC-----
TACCCACAATGCATTG
 A C G T C G A T A T G C G A T C G A T C G C T A A G T C G C T A A T G C G C A T T A G C A C G T A C G T A C G T A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCCCACASTC
AAACCACANN-
 A C G T C G A T A T G C G A T C G A T C G C T A A G T C G C T A A T G C G C A T T A G C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T