Information for 7-CTKAAGSKARCAA (Motif 10)

A T G C A C G T A C T G C G T A C G T A A C T G A T C G C A T G C G T A C T A G A G T C G T C A C G T A
Reverse Opposite:
A C G T A C G T A C T G A G T C A C G T G T A C A T G C A G T C A C G T A C G T G T A C C G T A A T C G
p-value:1e-11
log p-value:-2.682e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.7 +/- 13.3bp
Average Position of motif in Background70.5 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTKAAGSKARCAA----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A T G C A C G T A C T G C G T A C G T A A C T G A T C G C A T G C G T A C T A G A G T C G T C A C G T A A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTKAAGSKARCAA----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A T G C A C G T A C T G C G T A C G T A A C T G A T C G C A T G C G T A C T A G A G T C G T C A C G T A A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:CTKAAGSKARCAA-
--------AACAAT
 A T G C A C G T A C T G C G T A C G T A A C T G A T C G C A T G C G T A C T A G A G T C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

PH0014.1_Cphx/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTKAAGSKARCAA-
ATGATCGAATCAAA
 A T G C A C G T A C T G C G T A C G T A A C T G A T C G C A T G C G T A C T A G A G T C G T C A C G T A A C G T
C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTKAAGSKARCAA--
NNTGTAGGTAGCANNT
 A C G T A T G C A C G T A C T G C G T A C G T A A C T G A T C G C A T G C G T A C T A G A G T C G T C A C G T A A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CTKAAGSKARCAA-
-------NAACAAT
 A T G C A C G T A C T G C G T A C G T A A C T G A T C G C A T G C G T A C T A G A G T C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTKAAGSKARCAA-------
---AGAAGAACAAAGGACTA
 A T G C A C G T A C T G C G T A C G T A A C T G A T C G C A T G C G T A C T A G A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

FOXC2/MA0846.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTKAAGSKARCAA-
--TAAGTAAACAAA
 A T G C A C G T A C T G C G T A C G T A A C T G A T C G C A T G C G T A C T A G A G T C G T C A C G T A A C G T
A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CTKAAGSKARCAA-------
---TAGTGAACAATAGATTT
 A T G C A C G T A C T G C G T A C G T A A C T G A T C G C A T G C G T A C T A G A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CTKAAGSKARCAA---
------RNAACAATGG
 A T G C A C G T A C T G C G T A C G T A A C T G A T C G C A T G C G T A C T A G A G T C G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G