Information for 1-GAGAACTCAYACT (Motif 1)

C T A G C G T A A T C G C T G A C G T A A G T C C A G T G T A C G T C A G A C T C T G A G A T C G C A T
Reverse Opposite:
C G T A C T A G G A C T C T G A C A G T A C T G G C T A T C A G G A C T A G C T A T G C C G A T G A T C
p-value:1e-77
log p-value:-1.792e+02
Information Content per bp:1.687
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif9.69%
Number of Background Sequences with motif70.4
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets45.9 +/- 28.0bp
Average Position of motif in Background53.6 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GAGAACTCAYACT-
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T C T A G C G T A A T C G C T G A C G T A A G T C C A G T G T A C G T C A G A C T C T G A G A T C G C A T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------GAGAACTCAYACT
TTGACCGAGAATTCC----
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A T C G C T G A C G T A A G T C C A G T G T A C G T C A G A C T C T G A G A T C G C A T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAGAACTCAYACT
-AAAAGTCAA---
 C T A G C G T A A T C G C T G A C G T A A G T C C A G T G T A C G T C A G A C T C T G A G A T C G C A T
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GAGAACTCAYACT
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T C T A G C G T A A T C G C T G A C G T A A G T C C A G T G T A C G T C A G A C T C T G A G A T C G C A T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGAACTCAYACT
-ATGACTCAT---
 C T A G C G T A A T C G C T G A C G T A A G T C C A G T G T A C G T C A G A C T C T G A G A T C G C A T
A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAGAACTCAYACT
AAGCACTTAA---
 C T A G C G T A A T C G C T G A C G T A A G T C C A G T G T A C G T C A G A C T C T G A G A T C G C A T
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GAGAACTCAYACT
TATCATTAGAACGCT----
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A T C G C T G A C G T A A G T C C A G T G T A C G T C A G A C T C T G A G A T C G C A T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GAGAACTCAYACT
GNNACCGAGAATNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A T C G C T G A C G T A A G T C C A G T G T A C G T C A G A C T C T G A G A T C G C A T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T A C G T A C G T

JUND/MA0491.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAGAACTCAYACT
NATGAGTCACN--
 C T A G C G T A A T C G C T G A C G T A A G T C C A G T G T A C G T C A G A C T C T G A G A T C G C A T
A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAGAACTCAYACT
GGGAGGACNG-----
 A C G T A C G T C T A G C G T A A T C G C T G A C G T A A G T C C A G T G T A C G T C A G A C T C T G A G A T C G C A T
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T A C G T