Information for 5-GGRSAAMGGCASSYCC (Motif 8)

A C T G A C T G C T A G A T G C G T C A C G T A T G A C A C T G A C T G A G T C C G T A A T G C A T G C G A C T A T G C A G T C
Reverse Opposite:
A C T G A T C G C T G A A T C G T A C G A C G T A C T G A G T C G T A C A C T G A C G T A C G T A T C G A G T C A G T C A G T C
p-value:1e-13
log p-value:-3.077e+01
Information Content per bp:1.832
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.2 +/- 23.0bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGRSAAMGGCASSYCC
AGGTCAAGGTCA-----
 A C G T A C T G A C T G C T A G A T G C G T C A C G T A T G A C A C T G A C T G A G T C C G T A A T G C A T G C G A C T A T G C A G T C
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGRSAAMGGCASSYCC
TGGGGAAGGGCM-----
 A C G T A C T G A C T G C T A G A T G C G T C A C G T A T G A C A C T G A C T G A G T C C G T A A T G C A T G C G A C T A T G C A G T C
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGRSAAMGGCASSYCC
-TGGAACAGMA-----
 A C T G A C T G C T A G A T G C G T C A C G T A T G A C A C T G A C T G A G T C C G T A A T G C A T G C G A C T A T G C A G T C
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GGRSAAMGGCASSYCC
NNAGGGACAAGGGCNC----
 A C G T A C G T A C G T A C G T A C T G A C T G C T A G A T G C G T C A C G T A T G A C A C T G A C T G A G T C C G T A A T G C A T G C G A C T A T G C A G T C
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGRSAAMGGCASSYCC
GGAACAAAGR-------
 A C G T A C T G A C T G C T A G A T G C G T C A C G T A T G A C A C T G A C T G A G T C C G T A A T G C A T G C G A C T A T G C A G T C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGRSAAMGGCASSYCC
AGGTCAAGGTCA-----
 A C G T A C T G A C T G C T A G A T G C G T C A C G T A T G A C A C T G A C T G A G T C C G T A A T G C A T G C G A C T A T G C A G T C
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGRSAAMGGCASSYCC
-AACAAAGG-------
 A C T G A C T G C T A G A T G C G T C A C G T A T G A C A C T G A C T G A G T C C G T A A T G C A T G C G A C T A T G C A G T C
A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGRSAAMGGCASSYCC
AAAACAAAGG-------
 A C G T A C T G A C T G C T A G A T G C G T C A C G T A T G A C A C T G A C T G A G T C C G T A A T G C A T G C G A C T A T G C A G T C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GGRSAAMGGCASSYCC
TAGGGCAAAGGTCA----
 A C G T A C G T A C T G A C T G C T A G A T G C G T C A C G T A T G A C A C T G A C T G A G T C C G T A A T G C A T G C G A C T A T G C A G T C
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GGRSAAMGGCASSYCC----
---NNNNGGTACCCCCCANN
 A C T G A C T G C T A G A T G C G T C A C G T A T G A C A C T G A C T G A G T C C G T A A T G C A T G C G A C T A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C