Motif 4

Information for 6-KAGATAAGAY (Motif 4)

Reverse Opposite:

p-value:	1e-16
log p-value:	-3.745e+01
Information Content per bp:	1.572
Number of Target Sequences with motif	61.0
Percentage of Target Sequences with motif	7.19%
Number of Background Sequences with motif	960.9
Percentage of Background Sequences with motif	2.02%
Average Position of motif in Targets	48.5 +/- 22.6bp
Average Position of motif in Background	48.3 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)	-0.3
Multiplicity (# of sites on avg that occur together)	1.02
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:	1
Score:	0.89
Offset:	1
Orientation:	forward strand
Alignment:	KAGATAAGAY -AGATAASR-

GATA3/MA0037.2/Jaspar

Match Rank:	2
Score:	0.88
Offset:	1
Orientation:	forward strand
Alignment:	KAGATAAGAY -AGATAAGA-

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:	3
Score:	0.88
Offset:	-1
Orientation:	forward strand
Alignment:	-KAGATAAGAY NBWGATAAGR-

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:	4
Score:	0.88
Offset:	-1
Orientation:	reverse strand
Alignment:	-KAGATAAGAY NVAGATAAGR-

GATA5/MA0766.1/Jaspar

Match Rank:	5
Score:	0.87
Offset:	1
Orientation:	forward strand
Alignment:	KAGATAAGAY -AGATAAGA-

PB0023.1_Gata6_1/Jaspar

Match Rank:	6
Score:	0.86
Offset:	-4
Orientation:	forward strand
Alignment:	----KAGATAAGAY--- TATAGAGATAAGAATTG

Gata4/MA0482.1/Jaspar

Match Rank:	7
Score:	0.86
Offset:	-2
Orientation:	reverse strand
Alignment:	--KAGATAAGAY NNGAGATAAGA-

GATA2/MA0036.2/Jaspar

Match Rank:	8
Score:	0.85
Offset:	-1
Orientation:	reverse strand
Alignment:	-KAGATAAGAY--- NCAGATAAGAANNN

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:	9
Score:	0.85
Offset:	0
Orientation:	reverse strand
Alignment:	KAGATAAGAY NAGATAAGNN

PB0021.1_Gata3_1/Jaspar

Match Rank:	10
Score:	0.83
Offset:	-6
Orientation:	forward strand
Alignment:	------KAGATAAGAY------ TTTTTAGAGATAAGAAATAAAG