Information for 8-WCCTGCWGGCWSCAGM (Motif 13)

C G A T A T G C T G A C A C G T C A T G A G T C G C T A A C T G A T C G T G A C C G A T A T C G G T A C C G T A A T C G T G C A
Reverse Opposite:
A C G T T A G C G C A T A C T G A T G C C G T A A C T G A T G C A G T C C G A T C T A G G T A C T G C A A C T G T A C G G C T A
p-value:1e-9
log p-value:-2.134e+01
Information Content per bp:1.624
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif49.2
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets50.5 +/- 21.6bp
Average Position of motif in Background54.6 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.54
Offset:3
Orientation:forward strand
Alignment:WCCTGCWGGCWSCAGM
---TGCTGACTCA---
 C G A T A T G C T G A C A C G T C A T G A G T C G C T A A C T G A T C G T G A C C G A T A T C G G T A C C G T A A T C G T G C A
A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--WCCTGCWGGCWSCAGM
TCNCCTGCTGNGNNN---
 A C G T A C G T C G A T A T G C T G A C A C G T C A T G A G T C G C T A A C T G A T C G T G A C C G A T A T C G G T A C C G T A A T C G T G C A
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--WCCTGCWGGCWSCAGM
TNTCCTGCTGTGNNG---
 A C G T A C G T C G A T A T G C T G A C A C G T C A T G A G T C G C T A A C T G A T C G T G A C C G A T A T C G G T A C C G T A A T C G T G C A
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:WCCTGCWGGCWSCAGM
---TNNGGGCAG----
 C G A T A T G C T G A C A C G T C A T G A G T C G C T A A C T G A T C G T G A C C G A T A T C G G T A C C G T A A T C G T G C A
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:WCCTGCWGGCWSCAGM
----NTTGGCANN---
 C G A T A T G C T G A C A C G T C A T G A G T C G C T A A C T G A T C G T G A C C G A T A T C G G T A C C G T A A T C G T G C A
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:WCCTGCWGGCWSCAGM
--CAGCTGNT------
 C G A T A T G C T G A C A C G T C A T G A G T C G C T A A C T G A T C G T G A C C G A T A T C G G T A C C G T A A T C G T G C A
A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:WCCTGCWGGCWSCAGM
----CTTGGCAA----
 C G A T A T G C T G A C A C G T C A T G A G T C G C T A A C T G A T C G T G A C C G A T A T C G G T A C C G T A A T C G T G C A
A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----WCCTGCWGGCWSCAGM
GGCCYCCTGCTGDGH-----
 A C G T A C G T A C G T A C G T C G A T A T G C T G A C A C G T C A T G A G T C G C T A A C T G A T C G T G A C C G A T A T C G G T A C C G T A A T C G T G C A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:WCCTGCWGGCWSCAGM
-CCTGCTGAGH-----
 C G A T A T G C T G A C A C G T C A T G A G T C G C T A A C T G A T C G T G A C C G A T A T C G G T A C C G T A A T C G T G C A
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:WCCTGCWGGCWSCAGM
----BCAGACWA----
 C G A T A T G C T G A C A C G T C A T G A G T C G C T A A C T G A T C G T G A C C G A T A T C G G T A C C G T A A T C G T G C A
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T