Information for 7-TGCTGCTTTCTGGCTG (Motif 12)

C G A T A C T G A T G C C G A T A T C G T A G C A C G T A G C T A G C T A T G C A C G T A C T G T A C G G T A C C G A T A C T G
Reverse Opposite:
T A G C C G T A A C T G A G T C A G T C G T C A A T C G C T G A T C G A G T C A A T C G A T G C C G T A A T C G A G T C C G T A
p-value:1e-9
log p-value:-2.232e+01
Information Content per bp:1.747
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets59.2 +/- 20.8bp
Average Position of motif in Background67.6 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGCTGCTTTCTGGCTG
CAGCTGTTTCCT-----
 A C G T C G A T A C T G A T G C C G A T A T C G T A G C A C G T A G C T A G C T A T G C A C G T A C T G T A C G G T A C C G A T A C T G
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGCTGCTTTCTGGCTG--
-NNTNNTGTCTGGNNTNG
 C G A T A C T G A T G C C G A T A T C G T A G C A C G T A G C T A G C T A T G C A C G T A C T G T A C G G T A C C G A T A C T G A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:3
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TGCTGCTTTCTGGCTG
---CACTTCCTGT---
 C G A T A C T G A T G C C G A T A T C G T A G C A C G T A G C T A G C T A T G C A C G T A C T G T A C G G T A C C G A T A C T G
A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TGCTGCTTTCTGGCTG
------GGTCTGGCAT
 C G A T A C T G A T G C C G A T A T C G T A G C A C G T A G C T A G C T A T G C A C G T A C T G T A C G G T A C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TGCTGCTTTCTGGCTG
AGATGCTRCTRCCHT----
 A C G T A C G T A C G T C G A T A C T G A T G C C G A T A T C G T A G C A C G T A G C T A G C T A T G C A C G T A C T G T A C G G T A C C G A T A C T G
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.51
Offset:5
Orientation:forward strand
Alignment:TGCTGCTTTCTGGCTG
-----CTGTCTGG---
 C G A T A C T G A T G C C G A T A T C G T A G C A C G T A G C T A G C T A T G C A C G T A C T G T A C G G T A C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TGCTGCTTTCTGGCTG
GYCTGGYYTNTGTCA-
 C G A T A C T G A T G C C G A T A T C G T A G C A C G T A G C T A G C T A T G C A C G T A C T G T A C G G T A C C G A T A C T G
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:TGCTGCTTTCTGGCTG
---TGATTTATGGCC-
 C G A T A C T G A T G C C G A T A T C G T A G C A C G T A G C T A G C T A T G C A C G T A C T G T A C G G T A C C G A T A C T G
A C G T A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---TGCTGCTTTCTGGCTG
TNNTGCTACTGTNNNN---
 A C G T A C G T A C G T C G A T A C T G A T G C C G A T A T C G T A G C A C G T A G C T A G C T A T G C A C G T A C T G T A C G G T A C C G A T A C T G
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.48
Offset:9
Orientation:forward strand
Alignment:TGCTGCTTTCTGGCTG-
---------TWGTCTGV
 C G A T A C T G A T G C C G A T A T C G T A G C A C G T A G C T A G C T A T G C A C G T A C T G T A C G G T A C C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G