Information for 25-GCAGCAGCTGCTG (Motif 32)

A T C G A T G C G T C A A C T G A G T C C G T A A C T G A G T C C G A T A C T G A T G C A C G T A C T G
Reverse Opposite:
A G T C G T C A A T C G A G T C C G T A A C T G A G T C C G A T A C T G A G T C A C G T A T C G A T G C
p-value:1e-5
log p-value:-1.154e+01
Information Content per bp:1.885
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif17.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.2 +/- 35.8bp
Average Position of motif in Background44.8 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCAGCTGCTG--
NNNNAGCAGCTGCTGAN
 A C G T A C G T A T C G A T G C G T C A A C T G A G T C C G T A A C T G A G T C C G A T A C T G A T G C A C G T A C T G A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:GCAGCAGCTGCTG
--AGCAGCTGCT-
 A T C G A T G C G T C A A C T G A G T C C G T A A C T G A G T C C G A T A C T G A T G C A C G T A C T G
A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GCAGCAGCTGCTG
NNAGCAGCTGCT-
 A T C G A T G C G T C A A C T G A G T C C G T A A C T G A G T C C G A T A C T G A T G C A C G T A C T G
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.79
Offset:3
Orientation:forward strand
Alignment:GCAGCAGCTGCTG
---NCAGCTGCTG
 A T C G A T G C G T C A A C T G A G T C C G T A A C T G A G T C C G A T A C T G A T G C A C G T A C T G
A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:GCAGCAGCTGCTG
--CGCAGCTGCG-
 A T C G A T G C G T C A A C T G A G T C C G T A A C T G A G T C C G A T A C T G A T G C A C G T A C T G
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.76
Offset:2
Orientation:forward strand
Alignment:GCAGCAGCTGCTG
--GACAGCTGCAG
 A T C G A T G C G T C A A C T G A G T C C G T A A C T G A G T C C G A T A C T G A T G C A C G T A C T G
A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCAGCTGCTG
NGNGACAGCTGCN-
 A C G T A T C G A T G C G T C A A C T G A G T C C G T A A C T G A G T C C G A T A C T G A T G C A C G T A C T G
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GCAGCAGCTGCTG
--AACAGCTGCAG
 A T C G A T G C G T C A A C T G A G T C C G T A A C T G A G T C C G A T A C T G A T G C A C G T A C T G
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GCAGCAGCTGCTG
--ANCAGCTG---
 A T C G A T G C G T C A A C T G A G T C C G T A A C T G A G T C C G A T A C T G A T G C A C G T A C T G
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCAGCAGCTGCTG
NNVVCAGCTGBN-
 A T C G A T G C G T C A A C T G A G T C C G T A A C T G A G T C C G A T A C T G A T G C A C G T A C T G
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T