Information for 23-GCGACTTCCC (Motif 30)

A C T G A T G C A C T G C G T A G T A C A C G T A G C T A G T C A G T C A T G C
Reverse Opposite:
T A C G T C A G C T A G C T G A T G C A C A T G G C A T G T A C A T C G G T A C
p-value:1e-5
log p-value:-1.328e+01
Information Content per bp:1.751
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif204.7
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets56.2 +/- 26.0bp
Average Position of motif in Background49.1 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GCGACTTCCC
NGGGGATTTCCC
 A C G T A C G T A C T G A T G C A C T G C G T A G T A C A C G T A G C T A G T C A G T C A T G C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GCGACTTCCC-
AGGGGAATCCCCT
 A C G T A C G T A C T G A T G C A C T G C G T A G T A C A C G T A G C T A G T C A G T C A T G C A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCGACTTCCC
GGGGGAATCCCC
 A C G T A C G T A C T G A T G C A C T G C G T A G T A C A C G T A G C T A G T C A G T C A T G C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCGACTTCCC
GGGGATTTCC-
 A C G T A C T G A T G C A C T G C G T A G T A C A C G T A G C T A G T C A G T C A T G C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCGACTTCCC
GGGGATTTCC
 A C T G A T G C A C T G C G T A G T A C A C G T A G C T A G T C A G T C A T G C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFKB1/MA0105.4/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCGACTTCCC-
AGGGGATTCCCCT
 A C G T A C G T A C T G A T G C A C T G C G T A G T A C A C G T A G C T A G T C A G T C A T G C A C G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCGACTTCCC
GGGAATTTCC
 A C T G A T G C A C T G C G T A G T A C A C G T A G C T A G T C A G T C A T G C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCGACTTCCC
GGAAATTCCC
 A C T G A T G C A C T G C G T A G T A C A C G T A G C T A G T C A G T C A T G C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

PB0058.1_Sfpi1_1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCGACTTCCC-----
-NNACTTCCTCTTNN
 A C T G A T G C A C T G C G T A G T A C A C G T A G C T A G T C A G T C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCGACTTCCC---
---ACTTCCTBGT
 A C T G A T G C A C T G C G T A G T A C A C G T A G C T A G T C A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G T C A G C T C G A T A G T C A T G C A C G T A T G C T C A G C G A T