Information for 21-GTTRTTKTCAWTC (Motif 23)

A C T G A G C T A C G T C T A G A C G T A C G T C A G T A C G T A G T C C G T A C G A T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G A T A C T G C G T A G T A C C G T A C G T A A G T C C G T A C T G A A G T C
p-value:1e-8
log p-value:-1.860e+01
Information Content per bp:1.889
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.8 +/- 19.4bp
Average Position of motif in Background46.6 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GTTRTTKTCAWTC
NNNTGTTGTTGTTNG--
 A C G T A C G T A C G T A C G T A C T G A G C T A C G T C T A G A C G T A C G T C A G T A C G T A G T C C G T A C G A T A C G T A G T C
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTTRTTKTCAWTC-
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A C T G A G C T A C G T C T A G A C G T A C G T C A G T A C G T A G T C C G T A C G A T A C G T A G T C A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTTRTTKTCAWTC-
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A C T G A G C T A C G T C T A G A C G T A C G T C A G T A C G T A G T C C G T A C G A T A C G T A G T C A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GTTRTTKTCAWTC--
---SCTGTCAVTCAV
 A C T G A G C T A C G T C T A G A C G T A C G T C A G T A C G T A G T C C G T A C G A T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

PB0120.1_Foxj1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTTRTTKTCAWTC
GTNTTGTTGTGANNT
 A C G T A C G T A C T G A G C T A C G T C T A G A C G T A C G T C A G T A C G T A G T C C G T A C G A T A C G T A G T C
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0062.1_Sox12_1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTTRTTKTCAWTC
TAATTGTTCTAAAC-
 A C G T A C G T A C T G A G C T A C G T C T A G A C G T A C G T C A G T A C G T A G T C C G T A C G A T A C G T A G T C
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GTTRTTKTCAWTC--
---NCTGTCAATCAN
 A C T G A G C T A C G T C T A G A C G T A C G T C A G T A C G T A G T C C G T A C G A T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PB0019.1_Foxl1_1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTTRTTKTCAWTC-
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A C T G A G C T A C G T C T A G A C G T A C G T C A G T A C G T A G T C C G T A C G A T A C G T A G T C A C G T
T G C A A G T C A T G C G C A T C G A T C G A T C T A G A G C T C G A T A C G T C G T A G A T C C G T A G C A T C G A T G C A T G C T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTTRTTKTCAWTC
NNTTTTGTTTTGATNT
 A C G T A C G T A C G T A C T G A G C T A C G T C T A G A C G T A C G T C A G T A C G T A G T C C G T A C G A T A C G T A G T C
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

FOXC1/MA0032.2/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTTRTTKTCAWTC
-ATATTTACATA-
 A C T G A G C T A C G T C T A G A C G T A C G T C A G T A C G T A G T C C G T A C G A T A C G T A G T C
A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T