Information for 15-CGTTGAAACG (Motif 17)

A G T C T C A G A C G T A C G T A C T G C G T A C G T A C T G A A G T C A C T G
Reverse Opposite:
A G T C T A C G A G C T A C G T A C G T A G T C C G T A C G T A A G T C A C T G
p-value:1e-8
log p-value:-2.027e+01
Information Content per bp:1.881
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif12.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets51.9 +/- 20.6bp
Average Position of motif in Background39.1 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGTTGAAACG-
-TTTGAAACCG
 A G T C T C A G A C G T A C G T A C T G C G T A C G T A C T G A A G T C A C T G A C G T
A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

MYBL2/MA0777.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGTTGAAACG--
AACCGTTAAACGGTC
 A C G T A C G T A C G T A G T C T C A G A C G T A C G T A C T G C G T A C G T A C T G A A G T C A C T G A C G T A C G T
C T G A C T G A T G A C T A G C C T A G C A G T A G C T C G T A T G C A G C T A T G A C A T C G A T C G G A C T G A T C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGTTGAAACG
CCTTTGATGT-
 A C G T A G T C T C A G A C G T A C G T A C T G C G T A C G T A C T G A A G T C A C T G
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGTTGAAACG-
-ACTGAAACCA
 A G T C T C A G A C G T A C G T A C T G C G T A C G T A C T G A A G T C A C T G A C G T
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGTTGAAACG
NATTCAAAT-
 A G T C T C A G A C G T A C G T A C T G C G T A C G T A C T G A A G T C A C T G
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGTTGAAACG--
CCGCATAGCAACGGA
 A C G T A C G T A C G T A G T C T C A G A C G T A C G T A C T G C G T A C G T A C T G A A G T C A C T G A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Esrra/MA0592.2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CGTTGAAACG
ATGACCTTGAA---
 A C G T A C G T A C G T A C G T A G T C T C A G A C G T A C G T A C T G C G T A C G T A C T G A A G T C A C T G
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CGTTGAAACG
TGACCTTGAN---
 A C G T A C G T A C G T A G T C T C A G A C G T A C G T A C T G C G T A C G T A C T G A A G T C A C T G
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGTTGAAACG
GGTGYTGACAGS
 A C G T A C G T A G T C T C A G A C G T A C G T A C T G C G T A C G T A C T G A A G T C A C T G
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGTTGAAACG---
NNCGTTGCTATGGNN
 A C G T A C G T A G T C T C A G A C G T A C G T A C T G C G T A C G T A C T G A A G T C A C T G A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A