Information for 20-CAGTGAGAATTAGTAA (Motif 15)

T A G C C G T A A T C G C G A T C T A G C T G A A C T G C G T A C T G A C G A T A C G T C T G A A C T G A C G T G C T A T C G A
Reverse Opposite:
A C G T C A G T G T C A A G T C A G C T G T C A C G T A A G C T A C G T A G T C A G C T G A T C C G T A T A G C A C G T A C T G
p-value:1e-10
log p-value:-2.306e+01
Information Content per bp:1.745
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.4 +/- 28.6bp
Average Position of motif in Background45.1 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0107.1_Msx2/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAGTGAGAATTAGTAA--
-ANCGCTAATTGGTCTNN
 T A G C C G T A A T C G C G A T C T A G C T G A A C T G C G T A C T G A C G A T A C G T C T G A A C T G A C G T G C T A T C G A A C G T A C G T
A C G T T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAGTGAGAATTAGTAA
-CSTGGGAAAD-----
 T A G C C G T A A T C G C G A T C T A G C T G A A C T G C G T A C T G A C G A T A C G T C T G A A C T G A C G T G C T A T C G A
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

PB0136.1_IRC900814_2/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CAGTGAGAATTAGTAA--
--ATGGAAAGTCGTAAAA
 T A G C C G T A A T C G C G A T C T A G C T G A A C T G C G T A C T G A C G A T A C G T C T G A A C T G A C G T G C T A T C G A A C G T A C G T
A C G T A C G T C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAGTGAGAATTAGTAA
TTGACCGAGAATTCC---
 A C G T A C G T T A G C C G T A A T C G C G A T C T A G C T G A A C T G C G T A C T G A C G A T A C G T C T G A A C T G A C G T G C T A T C G A
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:5
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CAGTGAGAATTAGTAA----
-----NNAATTAGTCACGGT
 T A G C C G T A A T C G C G A T C T A G C T G A A C T G C G T A C T G A C G A T A C G T C T G A A C T G A C G T G C T A T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

HMBOX1/MA0895.1/Jaspar

Match Rank:6
Score:0.51
Offset:8
Orientation:forward strand
Alignment:CAGTGAGAATTAGTAA--
--------ACTAGTTAAC
 T A G C C G T A A T C G C G A T C T A G C T G A A C T G C G T A C T G A C G A T A C G T C T G A A C T G A C G T G C T A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PH0155.1_Prrx2/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CAGTGAGAATTAGTAA--
-AAAGCTAATTAGCGAAA
 T A G C C G T A A T C G C G A T C T A G C T G A A C T G C G T A C T G A C G A T A C G T C T G A A C T G A C G T G C T A T C G A A C G T A C G T
A C G T C G T A T G C A G T C A T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A T G C T G A C G T A C T G A

PH0039.1_Mnx1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CAGTGAGAATTAGTAA--
--GTACTAATTAGTGGCG
 T A G C C G T A A T C G C G A T C T A G C T G A A C T G C G T A C T G A C G A T A C G T C T G A A C T G A C G T G C T A T C G A A C G T A C G T
A C G T A C G T A C T G A C G T T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A A T C G A C G T C T A G T A C G G A T C T A C G

PB0114.1_Egr1_2/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CAGTGAGAATTAGTAA
TGCGGAGTGGGACTGG----
 A C G T A C G T A C G T A C G T T A G C C G T A A T C G C G A T C T A G C T G A A C T G C G T A C T G A C G A T A C G T C T G A A C T G A C G T G C T A T C G A
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G A C G T A C G T A C G T A C G T

PH0133.1_Pax7/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CAGTGAGAATTAGTAA--
-CGAACTAATTAGTACTA
 T A G C C G T A A T C G C G A T C T A G C T G A A C T G C G T A C T G A C G A T A C G T C T G A A C T G A C G T G C T A T C G A A C G T A C G T
A C G T G T A C T A C G G C T A G T A C G A T C G A C T T C G A C G T A G C A T A G C T C T G A C T A G A C G T G C T A T G A C C A G T C T G A