Information for 4-TTTCATGTGGGCAGKA (Motif 5)

G C A T A C G T A G C T A T G C C G T A A C G T A T C G A C G T A C T G A C T G A T C G A T G C C G T A A C T G C A T G C T G A
Reverse Opposite:
A G C T G T A C G T A C G A C T A T C G A T G C G T A C G T A C C G T A A T G C C G T A A C G T T A C G C T G A C G T A C G T A
p-value:1e-21
log p-value:-4.959e+01
Information Content per bp:1.766
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.7 +/- 17.6bp
Average Position of motif in Background24.1 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TTTCATGTGGGCAGKA
---TATGCGGGTA---
 G C A T A C G T A G C T A T G C C G T A A C G T A T C G A C G T A C T G A C T G A T C G A T G C C G T A A C T G C A T G C T G A
A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTTCATGTGGGCAGKA
NNNNATGCGGGTNNNN
 G C A T A C G T A G C T A T G C C G T A A C G T A T C G A C G T A C T G A C T G A T C G A T G C C G T A A C T G C A T G C T G A
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TTTCATGTGGGCAGKA
-----TNNGGGCAG--
 G C A T A C G T A G C T A T G C C G T A A C G T A T C G A C G T A C T G A C T G A T C G A T G C C G T A A C T G C A T G C T G A
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTTCATGTGGGCAGKA
NANTTTCAAGTGGTTAN--
 A C G T A C G T A C G T G C A T A C G T A G C T A T G C C G T A A C G T A T C G A C G T A C T G A C T G A T C G A T G C C G T A A C T G C A T G C T G A
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TTTCATGTGGGCAGKA
NNNNNATTGATGNGTGN----
 A C G T A C G T A C G T A C G T A C G T G C A T A C G T A G C T A T G C C G T A A C G T A T C G A C G T A C T G A C T G A T C G A T G C C G T A A C T G C A T G C T G A
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTTCATGTGGGCAGKA
TNCCTTTGATGT--------
 A C G T A C G T A C G T A C G T G C A T A C G T A G C T A T G C C G T A A C G T A T C G A C G T A C T G A C T G A T C G A T G C C G T A A C T G C A T G C T G A
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTTCATGTGGGCAGKA
TTTTATKRGG------
 G C A T A C G T A G C T A T G C C G T A A C G T A T C G A C G T A C T G A C T G A T C G A T G C C G T A A C T G C A T G C T G A
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTTCATGTGGGCAGKA
AAATTCAAGTGGNTTN--
 A C G T A C G T G C A T A C G T A G C T A T G C C G T A A C G T A T C G A C G T A C T G A C T G A T C G A T G C C G T A A C T G C A T G C T G A
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTTCATGTGGGCAGKA
-NTCAAGTGGN-----
 G C A T A C G T A G C T A T G C C G T A A C G T A T C G A C G T A C T G A C T G A T C G A T G C C G T A A C T G C A T G C T G A
A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTTCATGTGGGCAGKA
--NNHTGTGGTTWN--
 G C A T A C G T A G C T A T G C C G T A A C G T A T C G A C G T A C T G A C T G A T C G A T G C C G T A A C T G C A T G C T G A
A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T