Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 815)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 47935)	% of Background Sequences with Motif
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-83	-1.927e+02	0.0000	233.0	28.59%	3096.6	6.46%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-80	-1.855e+02	0.0000	271.0	33.25%	4380.4	9.14%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-72	-1.674e+02	0.0000	204.0	25.03%	2692.6	5.62%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-67	-1.555e+02	0.0000	230.0	28.22%	3677.4	7.67%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-67	-1.545e+02	0.0000	185.0	22.70%	2376.0	4.96%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-60	-1.388e+02	0.0000	177.0	21.72%	2410.5	5.03%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-52	-1.204e+02	0.0000	129.0	15.83%	1437.2	3.00%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-46	-1.061e+02	0.0000	123.0	15.09%	1488.1	3.11%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e-40	-9.334e+01	0.0000	110.0	13.50%	1349.2	2.82%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-40	-9.329e+01	0.0000	96.0	11.78%	1011.5	2.11%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-38	-8.948e+01	0.0000	114.0	13.99%	1514.1	3.16%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e-38	-8.763e+01	0.0000	137.0	16.81%	2206.1	4.60%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e-36	-8.361e+01	0.0000	49.0	6.01%	226.2	0.47%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-34	-7.861e+01	0.0000	159.0	19.51%	3139.9	6.55%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-34	-7.857e+01	0.0000	84.0	10.31%	922.3	1.92%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-33	-7.724e+01	0.0000	108.0	13.25%	1564.3	3.26%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-33	-7.620e+01	0.0000	137.0	16.81%	2466.6	5.15%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-32	-7.598e+01	0.0000	109.0	13.37%	1616.5	3.37%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-30	-7.116e+01	0.0000	70.0	8.59%	697.5	1.46%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-30	-7.044e+01	0.0000	133.0	16.32%	2481.0	5.18%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-30	-6.969e+01	0.0000	110.0	13.50%	1772.0	3.70%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-29	-6.772e+01	0.0000	98.0	12.02%	1461.1	3.05%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-29	-6.745e+01	0.0000	103.0	12.64%	1611.2	3.36%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e-27	-6.394e+01	0.0000	102.0	12.52%	1655.8	3.46%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-27	-6.357e+01	0.0000	84.0	10.31%	1149.8	2.40%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e-27	-6.228e+01	0.0000	98.0	12.02%	1571.3	3.28%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e-25	-5.768e+01	0.0000	201.0	24.66%	5499.4	11.48%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-24	-5.600e+01	0.0000	69.0	8.47%	881.9	1.84%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e-23	-5.338e+01	0.0000	233.0	28.59%	7104.0	14.82%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e-22	-5.161e+01	0.0000	280.0	34.36%	9391.9	19.60%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-20	-4.824e+01	0.0000	88.0	10.80%	1586.8	3.31%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e-15	-3.501e+01	0.0000	175.0	21.47%	5541.9	11.56%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-13	-3.034e+01	0.0000	122.0	14.97%	3503.1	7.31%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e-12	-2.810e+01	0.0000	24.0	2.94%	208.3	0.43%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e-11	-2.720e+01	0.0000	83.0	10.18%	2082.0	4.34%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e-11	-2.536e+01	0.0000	155.0	19.02%	5257.4	10.97%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e-9	-2.257e+01	0.0000	102.0	12.52%	3078.6	6.42%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-9	-2.196e+01	0.0000	39.0	4.79%	702.9	1.47%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-8	-2.002e+01	0.0000	38.0	4.66%	721.5	1.51%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-8	-1.878e+01	0.0000	24.0	2.94%	333.3	0.70%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e-7	-1.829e+01	0.0000	20.0	2.45%	239.9	0.50%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-7	-1.829e+01	0.0000	42.0	5.15%	907.2	1.89%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-7	-1.809e+01	0.0000	122.0	14.97%	4267.2	8.90%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-7	-1.778e+01	0.0000	34.0	4.17%	653.2	1.36%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-7	-1.773e+01	0.0000	114.0	13.99%	3925.2	8.19%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-7	-1.749e+01	0.0000	39.0	4.79%	829.9	1.73%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e-6	-1.574e+01	0.0000	103.0	12.64%	3571.5	7.45%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e-6	-1.499e+01	0.0000	104.0	12.76%	3675.6	7.67%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-6	-1.494e+01	0.0000	26.0	3.19%	473.2	0.99%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-6	-1.443e+01	0.0000	43.0	5.28%	1087.1	2.27%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-6	-1.442e+01	0.0000	93.0	11.41%	3214.0	6.71%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-6	-1.402e+01	0.0000	209.0	25.64%	8993.1	18.77%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e-6	-1.388e+01	0.0000	96.0	11.78%	3393.7	7.08%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-5	-1.375e+01	0.0000	324.0	39.75%	15249.9	31.82%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e-5	-1.363e+01	0.0000	68.0	8.34%	2154.8	4.50%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e-5	-1.361e+01	0.0000	26.0	3.19%	509.0	1.06%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e-5	-1.350e+01	0.0000	33.0	4.05%	754.0	1.57%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-5	-1.349e+01	0.0000	20.0	2.45%	325.8	0.68%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e-5	-1.333e+01	0.0000	112.0	13.74%	4193.1	8.75%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-5	-1.281e+01	0.0000	27.0	3.31%	566.7	1.18%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e-5	-1.255e+01	0.0000	78.0	9.57%	2672.1	5.58%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e-4	-1.145e+01	0.0001	140.0	17.18%	5763.7	12.03%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e-4	-1.097e+01	0.0001	38.0	4.66%	1049.7	2.19%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-4	-1.001e+01	0.0003	105.0	12.88%	4181.8	8.73%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-4	-9.842e+00	0.0003	65.0	7.98%	2289.3	4.78%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e-4	-9.480e+00	0.0004	13.0	1.60%	207.2	0.43%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-4	-9.353e+00	0.0005	116.0	14.23%	4802.9	10.02%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-3	-7.793e+00	0.0022	17.0	2.09%	383.3	0.80%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-3	-7.493e+00	0.0029	7.0	0.86%	81.0	0.17%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e-3	-7.249e+00	0.0037	35.0	4.29%	1135.6	2.37%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e-3	-7.089e+00	0.0043	16.0	1.96%	372.2	0.78%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e-3	-7.003e+00	0.0046	94.0	11.53%	3985.7	8.32%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e-3	-6.974e+00	0.0047	33.0	4.05%	1066.1	2.22%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e-3	-6.910e+00	0.0049	39.0	4.79%	1336.6	2.79%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-2	-6.697e+00	0.0060	72.0	8.83%	2922.4	6.10%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e-2	-6.598e+00	0.0065	102.0	12.52%	4448.6	9.28%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e-2	-6.507e+00	0.0071	16.0	1.96%	394.9	0.82%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e-2	-6.411e+00	0.0077	120.0	14.72%	5410.4	11.29%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e-2	-6.310e+00	0.0084	122.0	14.97%	5531.7	11.54%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-2	-5.880e+00	0.0127	150.0	18.40%	7095.3	14.81%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e-2	-5.755e+00	0.0142	28.0	3.44%	929.2	1.94%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e-2	-5.696e+00	0.0149	39.0	4.79%	1434.7	2.99%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e-2	-5.535e+00	0.0173	30.0	3.68%	1034.6	2.16%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e-2	-5.468e+00	0.0183	29.0	3.56%	994.5	2.08%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-2	-5.451e+00	0.0184	12.0	1.47%	286.1	0.60%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-2	-5.419e+00	0.0188	46.0	5.64%	1792.3	3.74%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e-2	-5.060e+00	0.0265	8.0	0.98%	158.2	0.33%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e-2	-4.999e+00	0.0279	21.0	2.58%	673.1	1.40%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e-2	-4.900e+00	0.0305	14.0	1.72%	386.5	0.81%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e-2	-4.898e+00	0.0305	136.0	16.69%	6532.6	13.63%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e-2	-4.814e+00	0.0325	57.0	6.99%	2402.3	5.01%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e-2	-4.689e+00	0.0364	18.0	2.21%	563.1	1.17%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-1	-4.593e+00	0.0396	26.0	3.19%	925.7	1.93%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-1	-4.476e+00	0.0436	18.0	2.21%	576.4	1.20%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-1	-4.476e+00	0.0436	18.0	2.21%	576.2	1.20%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e-1	-4.366e+00	0.0482	20.0	2.45%	671.4	1.40%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e-1	-4.191e+00	0.0568	27.0	3.31%	1005.4	2.10%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e-1	-4.046e+00	0.0650	8.0	0.98%	190.1	0.40%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e-1	-4.022e+00	0.0659	3.0	0.37%	32.3	0.07%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e-1	-3.824e+00	0.0795	80.0	9.82%	3742.7	7.81%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e-1	-3.824e+00	0.0795	36.0	4.42%	1476.2	3.08%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e-1	-3.798e+00	0.0800	28.0	3.44%	1089.9	2.27%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-1	-3.747e+00	0.0834	4.0	0.49%	63.4	0.13%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e-1	-3.686e+00	0.0878	18.0	2.21%	630.3	1.32%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e-1	-3.633e+00	0.0917	75.0	9.20%	3512.7	7.33%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e-1	-3.628e+00	0.0917	8.0	0.98%	206.6	0.43%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e-1	-3.484e+00	0.1044	8.0	0.98%	212.8	0.44%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e-1	-3.476e+00	0.1044	2.0	0.25%	16.2	0.03%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e-1	-3.428e+00	0.1083	25.0	3.07%	981.2	2.05%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e-1	-3.362e+00	0.1147	61.0	7.48%	2821.3	5.89%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-1	-3.361e+00	0.1147	37.0	4.54%	1582.5	3.30%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e-1	-3.343e+00	0.1148	6.0	0.74%	141.4	0.30%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e-1	-3.319e+00	0.1165	11.0	1.35%	344.4	0.72%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e-1	-3.168e+00	0.1344	7.0	0.86%	186.9	0.39%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e-1	-3.165e+00	0.1344	4.0	0.49%	76.8	0.16%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e-1	-3.149e+00	0.1346	5.0	0.61%	111.1	0.23%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e-1	-3.099e+00	0.1403	29.0	3.56%	1213.3	2.53%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e-1	-3.008e+00	0.1524	10.0	1.23%	319.5	0.67%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e-1	-2.987e+00	0.1543	20.0	2.45%	783.7	1.64%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e-1	-2.958e+00	0.1575	70.0	8.59%	3375.2	7.04%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-1	-2.913e+00	0.1634	39.0	4.79%	1746.4	3.64%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e-1	-2.844e+00	0.1737	35.0	4.29%	1550.9	3.24%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e-1	-2.723e+00	0.1944	26.0	3.19%	1108.7	2.31%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e-1	-2.677e+00	0.2018	23.0	2.82%	963.0	2.01%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e-1	-2.632e+00	0.2094	38.0	4.66%	1737.4	3.63%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e-1	-2.618e+00	0.2108	6.0	0.74%	170.6	0.36%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e-1	-2.606e+00	0.2116	4.0	0.49%	92.5	0.19%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e-1	-2.595e+00	0.2124	11.0	1.35%	391.0	0.82%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-1	-2.579e+00	0.2141	28.0	3.44%	1228.7	2.56%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-1	-2.510e+00	0.2275	26.0	3.19%	1135.5	2.37%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e-1	-2.465e+00	0.2361	36.0	4.42%	1659.0	3.46%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e-1	-2.465e+00	0.2361	7.0	0.86%	220.7	0.46%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-1	-2.440e+00	0.2386	3.0	0.37%	61.6	0.13%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e-1	-2.429e+00	0.2394	10.0	1.23%	357.4	0.75%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-2.214e+00	0.2947	11.0	1.35%	421.1	0.88%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-2.192e+00	0.2988	20.0	2.45%	870.2	1.82%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-2.192e+00	0.2988	4.0	0.49%	107.0	0.22%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-2.188e+00	0.2988	128.0	15.71%	6783.7	14.16%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-2.187e+00	0.2988	1.0	0.12%	7.9	0.02%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	-2.187e+00	0.2988	1.0	0.12%	7.8	0.02%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-2.171e+00	0.2988	14.0	1.72%	571.3	1.19%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-2.122e+00	0.3070	32.0	3.93%	1505.8	3.14%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-2.117e+00	0.3070	34.0	4.17%	1612.8	3.37%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-2.112e+00	0.3070	30.0	3.68%	1401.3	2.92%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-2.072e+00	0.3161	18.0	2.21%	783.4	1.63%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-2.061e+00	0.3175	10.0	1.23%	386.9	0.81%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-2.033e+00	0.3241	12.0	1.47%	486.5	1.02%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-2.010e+00	0.3295	56.0	6.87%	2824.7	5.89%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-2.004e+00	0.3295	5.0	0.61%	158.5	0.33%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-1.987e+00	0.3328	3.0	0.37%	75.8	0.16%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-1.983e+00	0.3328	46.0	5.64%	2284.2	4.77%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-1.983e+00	0.3328	50.0	6.13%	2502.4	5.22%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-1.979e+00	0.3328	11.0	1.35%	442.2	0.92%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-1.960e+00	0.3328	4.0	0.49%	117.9	0.25%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-1.913e+00	0.3468	5.0	0.61%	163.7	0.34%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-1.887e+00	0.3536	87.0	10.67%	4578.6	9.55%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-1.798e+00	0.3842	6.0	0.74%	216.5	0.45%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-1.776e+00	0.3900	114.0	13.99%	6138.8	12.81%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-1.768e+00	0.3909	78.0	9.57%	4111.4	8.58%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-1.758e+00	0.3921	41.0	5.03%	2061.6	4.30%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-1.733e+00	0.3998	40.0	4.91%	2012.4	4.20%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-1.727e+00	0.3998	9.0	1.10%	367.9	0.77%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-1.702e+00	0.4073	30.0	3.68%	1474.0	3.08%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-1.659e+00	0.4222	34.0	4.17%	1700.7	3.55%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-1.655e+00	0.4222	8.0	0.98%	324.5	0.68%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-1.648e+00	0.4222	26.0	3.19%	1268.1	2.65%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-1.648e+00	0.4222	10.0	1.23%	425.2	0.89%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-1.581e+00	0.4457	7.0	0.86%	281.8	0.59%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-1.558e+00	0.4533	15.0	1.84%	695.8	1.45%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-1.554e+00	0.4533	14.0	1.72%	644.0	1.34%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-1.517e+00	0.4671	23.0	2.82%	1130.5	2.36%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-1.506e+00	0.4692	26.0	3.19%	1295.9	2.70%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-1.468e+00	0.4849	11.0	1.35%	497.8	1.04%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-1.447e+00	0.4922	19.0	2.33%	926.5	1.93%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-1.440e+00	0.4926	93.0	11.41%	5073.3	10.59%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	-1.434e+00	0.4928	1.0	0.12%	16.7	0.03%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-1.433e+00	0.4928	10.0	1.23%	449.5	0.94%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-1.413e+00	0.4976	25.0	3.07%	1259.2	2.63%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-1.413e+00	0.4976	26.0	3.19%	1314.2	2.74%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-1.397e+00	0.5001	20.0	2.45%	989.2	2.06%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-1.377e+00	0.5077	7.0	0.86%	301.0	0.63%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-1.359e+00	0.5137	33.0	4.05%	1713.9	3.58%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-1.357e+00	0.5137	30.0	3.68%	1547.6	3.23%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-1.333e+00	0.5217	1.0	0.12%	18.8	0.04%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-1.320e+00	0.5257	10.0	1.23%	463.6	0.97%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-1.306e+00	0.5303	22.0	2.70%	1116.4	2.33%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-1.303e+00	0.5303	4.0	0.49%	155.7	0.32%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-1.249e+00	0.5554	11.0	1.35%	526.5	1.10%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-1.220e+00	0.5686	20.0	2.45%	1023.5	2.14%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-1.207e+00	0.5728	11.0	1.35%	532.1	1.11%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-1.192e+00	0.5787	18.0	2.21%	918.1	1.92%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-1.189e+00	0.5787	68.0	8.34%	3745.1	7.81%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-1.112e+00	0.6203	8.0	0.98%	383.8	0.80%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-1.089e+00	0.6312	8.0	0.98%	386.7	0.81%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-1.082e+00	0.6327	3.0	0.37%	121.7	0.25%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-1.053e+00	0.6481	8.0	0.98%	391.2	0.82%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-1.047e+00	0.6488	6.0	0.74%	283.4	0.59%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-1.046e+00	0.6488	73.0	8.96%	4091.3	8.54%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.045e+00	0.6488	9.0	1.10%	447.8	0.93%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-1.045e+00	0.6488	26.0	3.19%	1400.1	2.92%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-1.014e+00	0.6571	107.0	13.13%	6074.0	12.67%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-1.011e+00	0.6571	5.0	0.61%	233.9	0.49%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-9.783e-01	0.6741	24.0	2.94%	1304.6	2.72%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-9.765e-01	0.6741	2.0	0.25%	77.1	0.16%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-9.758e-01	0.6741	67.0	8.22%	3776.1	7.88%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-9.607e-01	0.6761	2.0	0.25%	78.1	0.16%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-9.431e-01	0.6848	1.0	0.12%	29.8	0.06%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-9.406e-01	0.6848	22.0	2.70%	1200.3	2.50%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-9.402e-01	0.6848	20.0	2.45%	1086.5	2.27%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-9.330e-01	0.6848	22.0	2.70%	1202.9	2.51%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-9.202e-01	0.6874	3.0	0.37%	134.5	0.28%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-9.151e-01	0.6876	2.0	0.25%	81.8	0.17%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-9.123e-01	0.6876	53.0	6.50%	2995.0	6.25%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-9.121e-01	0.6876	9.0	1.10%	468.8	0.98%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-9.003e-01	0.6881	9.0	1.10%	470.6	0.98%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-8.811e-01	0.6982	10.0	1.23%	530.6	1.11%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-8.794e-01	0.6982	51.0	6.26%	2892.1	6.03%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-8.762e-01	0.6982	35.0	4.29%	1967.1	4.10%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-8.734e-01	0.6982	8.0	0.98%	418.8	0.87%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-8.634e-01	0.6982	64.0	7.85%	3654.3	7.63%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-8.541e-01	0.7011	34.0	4.17%	1917.7	4.00%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-7.563e-01	0.7697	5.0	0.61%	265.7	0.55%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-7.537e-01	0.7697	9.0	1.10%	498.0	1.04%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-7.490e-01	0.7697	150.0	18.40%	8753.4	18.26%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-7.472e-01	0.7697	3.0	0.37%	151.8	0.32%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	-7.421e-01	0.7697	1.0	0.12%	38.6	0.08%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-7.364e-01	0.7697	41.0	5.03%	2371.5	4.95%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-7.051e-01	0.7888	66.0	8.10%	3853.6	8.04%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-6.908e-01	0.7966	62.0	7.61%	3626.1	7.57%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-6.890e-01	0.7966	6.0	0.74%	334.3	0.70%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-6.762e-01	0.8013	14.0	1.72%	808.0	1.69%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-6.714e-01	0.8018	145.0	17.79%	8521.1	17.78%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-6.584e-01	0.8087	2.0	0.25%	102.2	0.21%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-6.454e-01	0.8158	112.0	13.74%	6599.4	13.77%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-6.371e-01	0.8191	4.0	0.49%	224.7	0.47%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-6.340e-01	0.8191	6.0	0.74%	344.6	0.72%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-6.310e-01	0.8191	10.0	1.23%	583.9	1.22%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-6.253e-01	0.8191	13.0	1.60%	763.6	1.59%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-6.251e-01	0.8191	15.0	1.84%	882.5	1.84%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-6.230e-01	0.8191	10.0	1.23%	585.1	1.22%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-6.195e-01	0.8191	2.0	0.25%	106.7	0.22%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-6.188e-01	0.8191	78.0	9.57%	4613.7	9.63%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-6.183e-01	0.8191	6.0	0.74%	347.1	0.72%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-5.988e-01	0.8197	4.0	0.49%	230.2	0.48%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-5.913e-01	0.8225	12.0	1.47%	713.2	1.49%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-5.855e-01	0.8239	28.0	3.44%	1670.3	3.49%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-5.745e-01	0.8297	5.0	0.61%	295.7	0.62%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	-5.574e-01	0.8406	2.0	0.25%	113.7	0.24%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-5.570e-01	0.8406	1.0	0.12%	50.8	0.11%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-5.542e-01	0.8406	7.0	0.86%	421.1	0.88%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-5.512e-01	0.8406	4.0	0.49%	238.1	0.50%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-5.327e-01	0.8479	51.0	6.26%	3068.7	6.40%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-5.250e-01	0.8511	2.0	0.25%	117.9	0.25%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	-4.980e-01	0.8710	1.0	0.12%	55.6	0.12%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-4.971e-01	0.8710	13.0	1.60%	804.0	1.68%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-4.908e-01	0.8710	16.0	1.96%	988.7	2.06%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-4.803e-01	0.8762	2.0	0.25%	123.6	0.26%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-4.791e-01	0.8762	12.0	1.47%	748.0	1.56%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-4.687e-01	0.8795	60.0	7.36%	3649.6	7.62%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-4.663e-01	0.8795	1.0	0.12%	58.8	0.12%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-4.656e-01	0.8795	18.0	2.21%	1120.3	2.34%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-4.655e-01	0.8795	76.0	9.33%	4608.3	9.62%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-4.603e-01	0.8795	8.0	0.98%	507.8	1.06%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-4.461e-01	0.8826	2.0	0.25%	128.7	0.27%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-4.395e-01	0.8851	3.0	0.37%	195.8	0.41%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-4.206e-01	0.8985	2.0	0.25%	132.7	0.28%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	-4.190e-01	0.8985	1.0	0.12%	63.3	0.13%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-4.026e-01	0.9081	2.0	0.25%	135.8	0.28%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-3.910e-01	0.9153	2.0	0.25%	138.0	0.29%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-3.740e-01	0.9275	6.0	0.74%	406.8	0.85%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-3.655e-01	0.9320	40.0	4.91%	2519.9	5.26%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-3.632e-01	0.9320	4.0	0.49%	278.2	0.58%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-3.486e-01	0.9409	9.0	1.10%	608.3	1.27%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-3.280e-01	0.9569	21.0	2.58%	1375.6	2.87%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-3.274e-01	0.9569	48.0	5.89%	3038.2	6.34%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-3.143e-01	0.9569	1.0	0.12%	77.8	0.16%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-3.143e-01	0.9569	1.0	0.12%	77.7	0.16%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	-3.143e-01	0.9569	1.0	0.12%	77.5	0.16%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-3.078e-01	0.9590	9.0	1.10%	625.2	1.30%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-2.914e-01	0.9714	13.0	1.60%	891.3	1.86%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-2.827e-01	0.9764	14.0	1.72%	960.8	2.00%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-2.687e-01	0.9866	79.0	9.69%	4989.8	10.41%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-2.632e-01	0.9885	105.0	12.88%	6572.1	13.71%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-2.569e-01	0.9913	7.0	0.86%	516.8	1.08%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-2.498e-01	0.9949	2.0	0.25%	168.5	0.35%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-2.467e-01	0.9949	14.0	1.72%	982.0	2.05%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-2.464e-01	0.9949	21.0	2.58%	1431.2	2.99%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-2.350e-01	0.9992	3.0	0.37%	247.2	0.52%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-2.327e-01	0.9992	16.0	1.96%	1121.8	2.34%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-2.294e-01	0.9992	73.0	8.96%	4676.1	9.76%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-2.277e-01	0.9992	11.0	1.35%	798.9	1.67%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-2.177e-01	1.0000	9.0	1.10%	671.9	1.40%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-2.002e-01	1.0000	13.0	1.60%	949.0	1.98%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-1.986e-01	1.0000	12.0	1.47%	884.7	1.85%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-1.958e-01	1.0000	2.0	0.25%	185.9	0.39%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-1.956e-01	1.0000	4.0	0.49%	336.5	0.70%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-1.930e-01	1.0000	2.0	0.25%	186.5	0.39%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.754e-01	1.0000	8.0	0.98%	630.3	1.32%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-1.727e-01	1.0000	10.0	1.23%	769.8	1.61%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-1.726e-01	1.0000	19.0	2.33%	1367.9	2.85%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-1.710e-01	1.0000	6.0	0.74%	493.2	1.03%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-1.633e-01	1.0000	5.0	0.61%	426.5	0.89%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-1.579e-01	1.0000	70.0	8.59%	4607.2	9.61%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-1.468e-01	1.0000	82.0	10.06%	5371.3	11.21%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-1.405e-01	1.0000	60.0	7.36%	4018.9	8.39%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-1.335e-01	1.0000	27.0	3.31%	1935.5	4.04%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-1.303e-01	1.0000	39.0	4.79%	2712.2	5.66%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-1.275e-01	1.0000	3.0	0.37%	297.8	0.62%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-1.227e-01	1.0000	12.0	1.47%	952.7	1.99%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-1.138e-01	1.0000	6.0	0.74%	536.3	1.12%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-1.121e-01	1.0000	2.0	0.25%	224.5	0.47%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-1.116e-01	1.0000	6.0	0.74%	538.4	1.12%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-1.115e-01	1.0000	13.0	1.60%	1034.1	2.16%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-1.105e-01	1.0000	2.0	0.25%	225.2	0.47%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-1.083e-01	1.0000	16.0	1.96%	1243.5	2.59%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-1.063e-01	1.0000	6.0	0.74%	543.8	1.13%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-1.043e-01	1.0000	2.0	0.25%	229.4	0.48%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-1.043e-01	1.0000	9.0	1.10%	763.3	1.59%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-8.784e-02	1.0000	2.0	0.25%	241.1	0.50%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-8.453e-02	1.0000	9.0	1.10%	789.0	1.65%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-8.445e-02	1.0000	3.0	0.37%	330.0	0.69%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-7.287e-02	1.0000	2.0	0.25%	254.5	0.53%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-7.113e-02	1.0000	20.0	2.45%	1580.7	3.30%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-6.919e-02	1.0000	12.0	1.47%	1028.2	2.15%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-6.829e-02	1.0000	36.0	4.42%	2654.2	5.54%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-6.673e-02	1.0000	4.0	0.49%	432.5	0.90%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-6.597e-02	1.0000	4.0	0.49%	433.4	0.90%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-5.136e-02	1.0000	11.0	1.35%	993.1	2.07%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-4.735e-02	1.0000	17.0	2.09%	1433.2	2.99%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-4.032e-02	1.0000	4.0	0.49%	475.4	0.99%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-3.608e-02	1.0000	1.0	0.12%	196.5	0.41%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-3.527e-02	1.0000	26.0	3.19%	2102.3	4.39%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-3.487e-02	1.0000	11.0	1.35%	1039.2	2.17%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-3.271e-02	1.0000	40.0	4.91%	3060.5	6.39%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-2.568e-02	1.0000	6.0	0.74%	682.1	1.42%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-2.287e-02	1.0000	19.0	2.33%	1676.2	3.50%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-2.198e-02	1.0000	20.0	2.45%	1753.9	3.66%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-2.104e-02	1.0000	8.0	0.98%	863.0	1.80%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-2.050e-02	1.0000	4.0	0.49%	531.8	1.11%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-2.004e-02	1.0000	25.0	3.07%	2120.7	4.43%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-1.423e-02	1.0000	36.0	4.42%	2936.0	6.13%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-1.354e-02	1.0000	16.0	1.96%	1525.2	3.18%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-1.146e-02	1.0000	8.0	0.98%	923.9	1.93%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-8.238e-03	1.0000	15.0	1.84%	1509.7	3.15%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-6.959e-03	1.0000	77.0	9.45%	5807.1	12.12%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-3.743e-03	1.0000	35.0	4.29%	3073.1	6.41%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-3.432e-03	1.0000	8.0	0.98%	1036.9	2.16%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-7.900e-04	1.0000	11.0	1.35%	1429.6	2.98%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-2.230e-04	1.0000	43.0	5.28%	4038.7	8.43%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-1.750e-04	1.0000	137.0	16.81%	10434.5	21.77%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-4.700e-05	1.0000	141.0	17.30%	10932.5	22.81%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	35.7	0.07%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	9.3	0.02%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	2.1	0.00%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	0.000e+00	1.0000	0.0	0.00%	42.2	0.09%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	0.000e+00	1.0000	0.0	0.00%	137.2	0.29%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	0.000e+00	1.0000	0.0	0.00%	137.2	0.29%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	8.0	0.02%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	49.9	0.10%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	27.6	0.06%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	79.0	0.16%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	1.8	0.00%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	69.3	0.14%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	45.5	0.09%