Information for 15-AGCCAGACCTCTA (Motif 15)

C G T A A C T G A G T C A G T C C G T A A C T G C T G A A T G C A G T C C G A T A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G C G T A A C T G A T C G A G C T A G T C A C G T A C T G A C T G A G T C A C G T
p-value:1e-8
log p-value:-1.950e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.2 +/- 23.9bp
Average Position of motif in Background50.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGCCAGACCTCTA
ATGCCAGACN----
 A C G T C G T A A C T G A G T C A G T C C G T A A C T G C T G A A T G C A G T C C G A T A G T C A C G T C G T A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGCCAGACCTCTA
--CNAGGCCT---
 C G T A A C T G A G T C A G T C C G T A A C T G C T G A A T G C A G T C C G A T A G T C A C G T C G T A
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGCCAGACCTCTA-
CAAATCCAGACATCACA
 A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C T G C T G A A T G C A G T C C G A T A G T C A C G T C G T A A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGCCAGACCTCTA---
----AGGTCTCTAACC
 C G T A A C T G A G T C A G T C C G T A A C T G C T G A A T G C A G T C C G A T A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGCCAGACCTCTA
GAGSCCGAGC----
 A C G T C G T A A C T G A G T C A G T C C G T A A C T G C T G A A T G C A G T C C G A T A G T C A C G T C G T A
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGCCAGACCTCTA
--CTAGGCCT---
 C G T A A C T G A G T C A G T C C G T A A C T G C T G A A T G C A G T C C G A T A G T C A C G T C G T A
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGCCAGACCTCTA
TGCCAA-------
 C G T A A C T G A G T C A G T C C G T A A C T G C T G A A T G C A G T C C G A T A G T C A C G T C G T A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGCCAGACCTCTA
CGTGCCAAG------
 A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C T G C T G A A T G C A G T C C G A T A G T C A C G T C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGCCAGACCTCTA
--CCAGACRSVB-
 C G T A A C T G A G T C A G T C C G T A A C T G C T G A A T G C A G T C C G A T A G T C A C G T C G T A
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGCCAGACCTCTA
NNGGCCACGCCTTTN
 A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C T G C T G A A T G C A G T C C G A T A G T C A C G T C G T A
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G