Information for 3-GGCATGCTGGGAR (Motif 2)

C A T G A C T G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G T C G A C T A G
Reverse Opposite:
G A T C A G C T A G T C A G T C A G T C C T G A A T C G T G A C T C G A A C G T A T C G G T A C G T A C
p-value:1e-89
log p-value:-2.071e+02
Information Content per bp:1.651
Number of Target Sequences with motif157.0
Percentage of Target Sequences with motif18.45%
Number of Background Sequences with motif1059.2
Percentage of Background Sequences with motif2.26%
Average Position of motif in Targets54.0 +/- 24.7bp
Average Position of motif in Background46.6 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GGCATGCTGGGAR--
RGSMTBCTGGGAAAT
 C A T G A C T G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G T C G A C T A G A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:2
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---GGCATGCTGGGAR
CAATGCATTGTGGGTA
 A C G T A C G T A C G T C A T G A C T G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G T C G A C T A G
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGCATGCTGGGAR-
TCNCCTGCTGNGNNN
 A C G T C A T G A C T G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G T C G A C T A G A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGCATGCTGGGAR--------
-GCATTCTGGGAATTGTAGTT
 C A T G A C T G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G T C G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGCATGCTGGGAR-
TNTCCTGCTGTGNNG
 A C G T C A T G A C T G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G T C G A C T A G A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGCATGCTGGGAR--------
-GCMTBCTGGGAGTTGTAGTY
 C A T G A C T G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G T C G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GGCATGCTGGGAR
---WDNCTGGGCA
 C A T G A C T G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G T C G A C T A G
A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:GGCATGCTGGGAR--
-----CSTGGGAAAD
 C A T G A C T G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G T C G A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGCATGCTGGGAR-
NNTCCTGCTGTGNNN
 A C G T C A T G A C T G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G T C G A C T A G A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGCATGCTGGGAR
--CCTGCTGAGH-
 C A T G A C T G T A G C T G C A A G C T A C T G T A G C A G C T A C T G A C T G A C T G T C G A C T A G
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T