Information for 9-CTCCCTGGAGGGA (Motif 11)

A T G C A G C T A T G C A G T C A G T C A G C T A C T G A T C G C G T A A C T G C T A G T A C G G T C A
Reverse Opposite:
C A G T A G T C A G T C G T A C C G A T A T G C T G A C C T G A A C T G C T A G A T C G C T G A T A C G
p-value:1e-12
log p-value:-2.910e+01
Information Content per bp:1.781
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif35.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets57.5 +/- 27.2bp
Average Position of motif in Background45.3 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CTCCCTGGAGGGA
-TCCCNNGGGACN
 A T G C A G C T A T G C A G T C A G T C A G C T A C T G A T C G C G T A A C T G C T A G T A C G G T C A
A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTCCCTGGAGGGA--
TTTCCTGGAAAGNNN
 A T G C A G C T A T G C A G T C A G T C A G C T A C T G A T C G C G T A A C T G C T A G T A C G G T C A A C G T A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

Bcl6/MA0463.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTCCCTGGAGGGA-
TTTCCTAGAAAGCA
 A T G C A G C T A T G C A G T C A G T C A G C T A C T G A T C G C G T A A C T G C T A G T A C G G T C A A C G T
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------CTCCCTGGAGGGA
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T G C A G T C A G T C A G C T A C T G A T C G C G T A A C T G C T A G T A C G G T C A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTCCCTGGAGGGA
CACCCCCGGGGGGG-
 A C G T A C G T A T G C A G C T A T G C A G T C A G T C A G C T A C T G A T C G C G T A A C T G C T A G T A C G G T C A
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTCCCTGGAGGGA
CCCCCCCGGGGGGGT
 A C G T A C G T A T G C A G C T A T G C A G T C A G T C A G C T A C T G A T C G C G T A A C T G C T A G T A C G G T C A
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTCCCTGGAGGGA
CCCCCCCGGGGGGGT
 A C G T A C G T A T G C A G C T A T G C A G T C A G T C A G C T A C T G A T C G C G T A A C T G C T A G T A C G G T C A
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCCCTGGAGGGA-
ATTCCCTGAGGGGAA
 A C G T A T G C A G C T A T G C A G T C A G T C A G C T A C T G A T C G C G T A A C T G C T A G T A C G G T C A A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTCCCTGGAGGGA-
ATTGCCTGAGGCGAA
 A C G T A T G C A G C T A T G C A G T C A G T C A G C T A C T G A T C G C G T A A C T G C T A G T A C G G T C A A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTCCCTGGAGGGA
CCCCCTGCTGTG-
 A T G C A G C T A T G C A G T C A G T C A G C T A C T G A T C G C G T A A C T G C T A G T A C G G T C A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T