Information for 6-CCCTCTGGACGTC (Motif 5)

A G T C A G T C A G T C A C G T A G T C A C G T A C T G A T C G C G T A A T G C A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A G T A C A T C G A C G T T A G C G T A C C G T A A C T G C G T A A C T G A C T G A C T G
p-value:1e-13
log p-value:-3.091e+01
Information Content per bp:1.932
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.0 +/- 10.5bp
Average Position of motif in Background28.6 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.58
Offset:-8
Orientation:forward strand
Alignment:--------CCCTCTGGACGTC
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C T G A T C G C G T A A T G C A C T G A C G T A G T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CCCTCTGGACGTC-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C T G A T C G C G T A A T G C A C T G A C G T A G T C A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CCCTCTGGACGTC
CCNNACCATCTGGCCTN-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C T G A T C G C G T A A T G C A C T G A C G T A G T C
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCTGGACGTC
TGACCTTTTGACCTC
 A C G T A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C T G A T C G C G T A A T G C A C T G A C G T A G T C
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CCCTCTGGACGTC-
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C T G A T C G C G T A A T G C A C T G A C G T A G T C A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:CCCTCTGGACGTC-
--------ACGTCA
 A G T C A G T C A G T C A C G T A G T C A C G T A C T G A T C G C G T A A T G C A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCCTCTGGACGTC
AACATCTGGA----
 A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C T G A T C G C G T A A T G C A C T G A C G T A G T C
T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCCTCTGGACGTC
GCCATCTGTT----
 A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C T G A T C G C G T A A T G C A C T G A C G T A G T C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CCCTCTGGACGTC-
------TGACGTCA
 A G T C A G T C A G T C A C G T A G T C A C G T A C T G A T C G C G T A A T G C A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCCTCTGGACGTC
VBSYGTCTGG-----
 A C G T A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C T G A T C G C G T A A T G C A C T G A C G T A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T